RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
TRIM13-208ENST00000478111 GCSHP23434 173 aa11.22□□□□□ -0.61
TRIM13-208ENST00000478111 TIRAPP58753 221 aa11.22□□□□□ -0.61
TRIM13-208ENST00000478111 TAS2R45P59539 299 aa11.22□□□□□ -0.61
TRIM13-208ENST00000478111 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
TRIM13-208ENST00000478111 MBD2Q9UBB5 411 aa11.22□□□□□ -0.61
TRIM13-208ENST00000478111 TRAV8-1A0A0A6YYK1 113 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 LRCOL1A6NCL2 159 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 INMT-MINDY4F8WBC2 141 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 UPK1BO75841 260 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
TRIM13-208ENST00000478111 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 ARL6IP6Q8N6S5 226 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 FRZBQ92765 325 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
TRIM13-208ENST00000478111 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
TRIM13-208ENST00000478111 F6UZH7 168 aa11.2□□□□□ -0.62
TRIM13-208ENST00000478111 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
TRIM13-208ENST00000478111 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 RPL12P30050 165 aaKnown RBP11.19□□□□□ -0.62
TRIM13-208ENST00000478111 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
TRIM13-208ENST00000478111 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 GNG5P63218 68 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 HAMPP81172 84 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 DPPA3Q6W0C5 159 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 PQLC2Q6ZP29 291 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 NHLRC2Q8NBF2 726 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
TRIM13-208ENST00000478111 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-208ENST00000478111 RAB2AP61019 212 aa11.17□□□□□ -0.62
TRIM13-208ENST00000478111 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
TRIM13-208ENST00000478111 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
TRIM13-208ENST00000478111 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
TRIM13-208ENST00000478111 IGLV5-52A0A0A0MRZ9 124 aa11.16□□□□□ -0.62
TRIM13-208ENST00000478111 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
TRIM13-208ENST00000478111 RS1O15537 224 aa11.16□□□□□ -0.62
TRIM13-208ENST00000478111 ACOT6Q3I5F7 207 aaPredicted RBP11.16□□□□□ -0.62
TRIM13-208ENST00000478111 CFAP126Q5VTH2 177 aa11.16□□□□□ -0.62
TRIM13-208ENST00000478111 SGK494Q96LW2 274 aa11.16□□□□□ -0.62
TRIM13-208ENST00000478111 A0A1W2PPV4 95 aa11.15□□□□□ -0.62
TRIM13-208ENST00000478111 HMGB3O15347 200 aaKnown RBP11.15□□□□□ -0.62
TRIM13-208ENST00000478111 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
TRIM13-208ENST00000478111 PET100P0DJ07 73 aa11.15□□□□□ -0.62
TRIM13-208ENST00000478111 PPT1P50897 306 aa11.15□□□□□ -0.62
TRIM13-208ENST00000478111 ZNF876PQ49A33 203 aa11.15□□□□□ -0.62
TRIM13-208ENST00000478111 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
TRIM13-208ENST00000478111 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
TRIM13-208ENST00000478111 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 PSCAO43653 123 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 SSNA1O43805 119 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 Q8N814 137 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
TRIM13-208ENST00000478111 TRAV8-6A0A0B4J262 113 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 Q9HAA7 133 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 FAM30AQ9NZY2 134 aa11.13□□□□□ -0.63
TRIM13-208ENST00000478111 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 CIDEAO60543 219 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 IGHV3-30P01768 117 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 TCRAP04437 139 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 STAG3L3P0CL85 134 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 IGHV3-30-3P0DP02 117 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 IGHV3-30-5P0DP03 117 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 RHOHQ15669 191 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 LELP1Q5T871 98 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 TMEM75Q8N9X5 138 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 PTH2Q96A98 100 aa11.12□□□□□ -0.63
TRIM13-208ENST00000478111 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 GCGP01275 180 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
TRIM13-208ENST00000478111 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 Q6ZSN1 163 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 C5orf17Q8NAS9 161 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 PSG8Q9UQ74 426 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
TRIM13-208ENST00000478111 LRP1Q07954 4544 aaKnown RBP11.1□□□□□ -0.63
TRIM13-208ENST00000478111 TAAR5O14804 337 aa11.1□□□□□ -0.63
TRIM13-208ENST00000478111 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
TRIM13-208ENST00000478111 WFDC2Q14508 124 aa11.1□□□□□ -0.63
TRIM13-208ENST00000478111 Q8N3U1 123 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms