RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 U3KQK5 164 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 MXRA5Q9NR99 2828 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 IGKV2-40A0A087WW87 121 aaPredicted RBP3.8□□□□□ -1.8
SF3B6-202ENST00000478050 TRBV7-1A0A0A6YYK4 115 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 A0A1W2PPR1 153 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 M0QZ24 198 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 NPFFO15130 113 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 ATP6V0E1O15342 81 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 DLEU1O43261 78 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 NDUFS7O75251 213 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 IGKV2D-40P01614 121 aaPredicted RBP3.8□□□□□ -1.8
SF3B6-202ENST00000478050 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 CLEC3BP05452 202 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 IGLC6P0CF74 106 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 IGLL1P15814 213 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 G0S2P27469 103 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 GPR183P32249 361 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 SAA4P35542 130 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 SUMO2P61956 95 aaKnown RBP3.8□□□□□ -1.8
SF3B6-202ENST00000478050 LMO4P61968 165 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 RHOGP84095 191 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 BATFQ16520 125 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 ECSCRQ19T08 205 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 FAM104BQ5XKR9 115 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 LYZL1Q6UWQ5 148 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 ATOH7Q8N100 152 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 ORMDL3Q8N138 153 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 FER1L6-AS1Q8NA97 138 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 PRSS3P2Q8NHM4 247 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 ITLN2Q8WWU7 325 aaPredicted RBP3.8□□□□□ -1.8
SF3B6-202ENST00000478050 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
SF3B6-202ENST00000478050 MS4A6AQ9H2W1 248 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 HIF1ANQ9NWT6 349 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 SMAD5-AS1Q9Y6J3 95 aa3.8□□□□□ -1.8
SF3B6-202ENST00000478050 TMSB15BA0A087X1C1 80 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 FAM223BA6NKX1 122 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 FABP5P3A8MUU1 101 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 BUB3O43684 328 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 CSN3P07498 182 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 CRIP2P52943 208 aaPredicted RBP3.79□□□□□ -1.8
SF3B6-202ENST00000478050 HIST1H1AQ02539 215 aaPredicted RBP3.79□□□□□ -1.8
SF3B6-202ENST00000478050 C15orf32Q32M92 178 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 MAJINQ3KP22 176 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 LINC00173Q6ZV60 143 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 SPATA12Q7Z6I5 190 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 FAM223AQ8IWN6 122 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 C5orf56Q8N8D9 126 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 DPF1Q92782 380 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 PRELID3AQ96N28 172 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 METTL26Q96S19 204 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 ASCL2Q99929 193 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 VGLL1Q99990 258 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 PMCHL2Q9BQD1 86 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 TMEM208Q9BTX3 173 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 CNFNQ9BYD5 112 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 BPESC1Q9GZL8 116 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 NPFFR1Q9GZQ6 430 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 GOLT1BQ9Y3E0 138 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 TGP01266 2768 aa3.79□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF469Q96JG9 3925 aaPredicted RBP3.78□□□□□ -1.8
SF3B6-202ENST00000478050 TRAV41A0A0B4J266 112 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 TMEM213A2RRL7 107 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 D6R8Y8 96 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 BRI3O95415 125 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 IGHG4P01861 327 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 HBDP02042 147 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 PPBPP02775 128 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 HLA-DMBP28068 263 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 CKS2P33552 79 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF138P52744 262 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 ATP5G2Q06055 141 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 PAX8Q06710 450 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 TWIST1Q15672 202 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 LGALS9BQ3B8N2 356 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 MRPL51Q4U2R6 128 aaKnown RBP3.78□□□□□ -1.8
SF3B6-202ENST00000478050 LGALS9CQ6DKI2 356 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 CLEC19AQ6UXS0 136 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 AMN1Q8IY45 258 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 STPG4Q8N801 248 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 Q8TAT8 98 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 PIMREGQ9BSJ6 248 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 BEX4Q9NWD9 120 aaPredicted RBP3.78□□□□□ -1.8
SF3B6-202ENST00000478050 PPP1R14DQ9NXH3 145 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 SIGLEC8Q9NYZ4 499 aa3.78□□□□□ -1.8
SF3B6-202ENST00000478050 MGAM2Q2M2H8 2515 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 LOC389332A0A1B0GUA5 103 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 hDV102S1A0JD36 115 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 GAGE12BA1L429 117 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 CLPSL1A2RUU4 121 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 GAGE12HA6NDE8 117 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 INAFM1C9JVW0 142 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 G3V318 75 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms