RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SDIM1Q6ZPB5 146 aa2.57□□□□□ -2
VPS50-214ENST00000477935 SPATA24Q86W54 205 aa2.57□□□□□ -2
VPS50-214ENST00000477935 CENPNQ96H22 339 aaPredicted RBP2.57□□□□□ -2
VPS50-214ENST00000477935 C2orf50Q96LR7 162 aa2.57□□□□□ -2
VPS50-214ENST00000477935 HIST1H4GQ99525 98 aa2.57□□□□□ -2
VPS50-214ENST00000477935 PDCD10Q9BUL8 212 aa2.57□□□□□ -2
VPS50-214ENST00000477935 PBDC1Q9BVG4 233 aa2.57□□□□□ -2
VPS50-214ENST00000477935 CCDC90BQ9GZT6 254 aa2.57□□□□□ -2
VPS50-214ENST00000477935 ENY2Q9NPA8 101 aa2.57□□□□□ -2
VPS50-214ENST00000477935 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
VPS50-214ENST00000477935 A0A096LNJ9 63 aa2.56□□□□□ -2
VPS50-214ENST00000477935 TCRBV3S1A0A5B6 114 aa2.56□□□□□ -2
VPS50-214ENST00000477935 FABP12A6NFH5 140 aa2.56□□□□□ -2
VPS50-214ENST00000477935 PGLYRP1O75594 196 aaPredicted RBP2.56□□□□□ -2
VPS50-214ENST00000477935 IGHV3-53P01767 116 aa2.56□□□□□ -2
VPS50-214ENST00000477935 PTHLHP12272 177 aa2.56□□□□□ -2
VPS50-214ENST00000477935 S100GP29377 79 aa2.56□□□□□ -2
VPS50-214ENST00000477935 CNBPP62633 177 aaKnown RBP2.56□□□□□ -2
VPS50-214ENST00000477935 PRR3P79522 188 aaKnown RBP2.56□□□□□ -2
VPS50-214ENST00000477935 RPL19P84098 196 aaKnown RBP2.56□□□□□ -2
VPS50-214ENST00000477935 FGL1Q08830 312 aa2.56□□□□□ -2
VPS50-214ENST00000477935 BSXQ3C1V8 233 aa2.56□□□□□ -2
VPS50-214ENST00000477935 CDNFQ49AH0 187 aa2.56□□□□□ -2
VPS50-214ENST00000477935 UQCC3Q6UW78 93 aa2.56□□□□□ -2
VPS50-214ENST00000477935 ZNF818PQ6ZRF7 136 aa2.56□□□□□ -2
VPS50-214ENST00000477935 SLC35G3Q8N808 338 aa2.56□□□□□ -2
VPS50-214ENST00000477935 C11orf72Q8NBR9 251 aa2.56□□□□□ -2
VPS50-214ENST00000477935 ZNF738Q8NE65 137 aa2.56□□□□□ -2
VPS50-214ENST00000477935 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
VPS50-214ENST00000477935 CCDC124Q96CT7 223 aaKnown RBP2.56□□□□□ -2
VPS50-214ENST00000477935 SEC22AQ96IW7 307 aa2.56□□□□□ -2
VPS50-214ENST00000477935 RBKSQ9H477 322 aa2.56□□□□□ -2
VPS50-214ENST00000477935 TMEM56-RWDD3S4R434 201 aa2.56□□□□□ -2
VPS50-214ENST00000477935 TRAV8-2A0A0B4J237 113 aa2.55□□□□□ -2
VPS50-214ENST00000477935 ATG12O94817 140 aa2.55□□□□□ -2
VPS50-214ENST00000477935 CRISP2P16562 243 aa2.55□□□□□ -2
VPS50-214ENST00000477935 TCL1AP56279 114 aa2.55□□□□□ -2
VPS50-214ENST00000477935 INSL4Q14641 139 aa2.55□□□□□ -2
VPS50-214ENST00000477935 Q6ZN92 141 aa2.55□□□□□ -2
VPS50-214ENST00000477935 EIF4E3Q8N5X7 224 aaKnown RBP2.55□□□□□ -2
VPS50-214ENST00000477935 Q8TAT8 98 aa2.55□□□□□ -2
VPS50-214ENST00000477935 ODF3Q96PU9 254 aa2.55□□□□□ -2
VPS50-214ENST00000477935 PLAC8Q9NZF1 115 aa2.55□□□□□ -2
VPS50-214ENST00000477935 RRP15Q9Y3B9 282 aaKnown RBP2.55□□□□□ -2
VPS50-214ENST00000477935 SSPOA2VEC9 5147 aa2.54□□□□□ -2
VPS50-214ENST00000477935 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
VPS50-214ENST00000477935 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
VPS50-214ENST00000477935 PNMA8CA0A1B0GUJ8 204 aa2.54□□□□□ -2
VPS50-214ENST00000477935 EFCAB10A6NFE3 127 aa2.54□□□□□ -2
VPS50-214ENST00000477935 CRYM-AS1A6NIL9 109 aa2.54□□□□□ -2
VPS50-214ENST00000477935 CASQ2O14958 399 aaPredicted RBP2.54□□□□□ -2
VPS50-214ENST00000477935 AGPAT2O15120 278 aa2.54□□□□□ -2
VPS50-214ENST00000477935 ARL6IP5O75915 188 aa2.54□□□□□ -2
VPS50-214ENST00000477935 SCGNO76038 276 aa2.54□□□□□ -2
VPS50-214ENST00000477935 SLC25A5P05141 298 aaKnown RBP2.54□□□□□ -2
VPS50-214ENST00000477935 UCHL1P09936 223 aa2.54□□□□□ -2
VPS50-214ENST00000477935 CXCL3P19876 107 aa2.54□□□□□ -2
VPS50-214ENST00000477935 HRH1P35367 487 aa2.54□□□□□ -2
VPS50-214ENST00000477935 FXYD4P59646 89 aa2.54□□□□□ -2
VPS50-214ENST00000477935 GNG2P59768 71 aa2.54□□□□□ -2
VPS50-214ENST00000477935 CACNG7P62955 275 aa2.54□□□□□ -2
VPS50-214ENST00000477935 Q0VG73 95 aa2.54□□□□□ -2
VPS50-214ENST00000477935 ELOBQ15370 118 aa2.54□□□□□ -2
VPS50-214ENST00000477935 GUK1Q16774 197 aa2.54□□□□□ -2
VPS50-214ENST00000477935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.54□□□□□ -2
VPS50-214ENST00000477935 BPIFCQ8NFQ6 507 aa2.54□□□□□ -2
VPS50-214ENST00000477935 OR10G4Q8NGN3 311 aa2.54□□□□□ -2
VPS50-214ENST00000477935 OR5H2Q8NGV7 314 aa2.54□□□□□ -2
VPS50-214ENST00000477935 LRRC20Q8TCA0 184 aa2.54□□□□□ -2
VPS50-214ENST00000477935 ZNF431Q8TF32 576 aaPredicted RBP2.54□□□□□ -2
VPS50-214ENST00000477935 ACY3Q96HD9 319 aa2.54□□□□□ -2
VPS50-214ENST00000477935 GTSF1LQ9H1H1 148 aa2.54□□□□□ -2
VPS50-214ENST00000477935 OR51M1Q9H341 326 aa2.54□□□□□ -2
VPS50-214ENST00000477935 C8orf4Q9NR00 106 aa2.54□□□□□ -2
VPS50-214ENST00000477935 CACFD1Q9UGQ2 172 aa2.54□□□□□ -2
VPS50-214ENST00000477935 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
VPS50-214ENST00000477935 IGKV1OR2-108A0A075B7D4 117 aa2.53□□□□□ -2
VPS50-214ENST00000477935 GABARAPH6UMI1 98 aa2.53□□□□□ -2
VPS50-214ENST00000477935 GPR31O00270 319 aa2.53□□□□□ -2
VPS50-214ENST00000477935 MED6O75586 246 aa2.53□□□□□ -2
VPS50-214ENST00000477935 GABARAPO95166 117 aa2.53□□□□□ -2
VPS50-214ENST00000477935 OR10J4P0C629 311 aa2.53□□□□□ -2
VPS50-214ENST00000477935 RPL7P18124 248 aaKnown RBP2.53□□□□□ -2
VPS50-214ENST00000477935 GPX4P36969 197 aaPredicted RBP2.53□□□□□ -2
VPS50-214ENST00000477935 ATP5IP56385 69 aaPredicted RBP2.53□□□□□ -2
VPS50-214ENST00000477935 TAS2R20P59543 309 aa2.53□□□□□ -2
VPS50-214ENST00000477935 SPCS3P61009 180 aa2.53□□□□□ -2
VPS50-214ENST00000477935 SPINK9Q5DT21 86 aa2.53□□□□□ -2
VPS50-214ENST00000477935 LPCAT3Q6P1A2 487 aa2.53□□□□□ -2
VPS50-214ENST00000477935 DAZ4Q86SG3 579 aaKnown RBP2.53□□□□□ -2
VPS50-214ENST00000477935 S100A7AQ86SG5 101 aa2.53□□□□□ -2
VPS50-214ENST00000477935 RNF182Q8N6D2 247 aa2.53□□□□□ -2
VPS50-214ENST00000477935 ZNF555Q8NEP9 628 aa2.53□□□□□ -2
VPS50-214ENST00000477935 UFD1Q92890 307 aa2.53□□□□□ -2
VPS50-214ENST00000477935 RTBDNQ9BSG5 229 aaPredicted RBP2.53□□□□□ -2
VPS50-214ENST00000477935 AP4S1Q9Y587 144 aa2.53□□□□□ -2
VPS50-214ENST00000477935 URGCP-MRPS24S4R325 110 aa2.53□□□□□ -2
VPS50-214ENST00000477935 IGHV3-64A0A075B6Q5 118 aa2.52□□□□□ -2.01
VPS50-214ENST00000477935 A0A087WWC5 75 aa2.52□□□□□ -2.01
VPS50-214ENST00000477935 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms