RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 MBD2Q9UBB5 411 aa8.86□□□□□ -0.99
PABPC4-212ENST00000477556 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 INMT-MINDY4F8WBC2 141 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 TIRAPP58753 221 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 GOLT1AQ6ZVE7 132 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 ARL6IP6Q8N6S5 226 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 SMIM3Q9BZL3 60 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 TREM1Q9NP99 234 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
PABPC4-212ENST00000477556 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
PABPC4-212ENST00000477556 A0A1W2PPV4 95 aa8.84□□□□□ -0.99
PABPC4-212ENST00000477556 F6UZH7 168 aa8.84□□□□□ -0.99
PABPC4-212ENST00000477556 TYMSP04818 313 aa8.84□□□□□ -0.99
PABPC4-212ENST00000477556 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-212ENST00000477556 ACOT6Q3I5F7 207 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-212ENST00000477556 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
PABPC4-212ENST00000477556 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-212ENST00000477556 IGLV5-52A0A0A0MRZ9 124 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 TRAV8-6A0A0B4J262 113 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 FBLL1A6NHQ2 334 aaKnown RBP8.83□□□□□ -1
PABPC4-212ENST00000477556 EIF3GO75821 320 aaKnown RBP eCLIP8.83□□□□□ -1
PABPC4-212ENST00000477556 UPK1BO75841 260 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 MPC2O95563 127 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 SMR3BP02814 79 aaPredicted RBP8.83□□□□□ -1
PABPC4-212ENST00000477556 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
PABPC4-212ENST00000477556 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
PABPC4-212ENST00000477556 H2BFSP57053 126 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 LINC01556Q5JQF7 62 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
PABPC4-212ENST00000477556 ASB13Q8WXK3 278 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
PABPC4-212ENST00000477556 TRAV8-1A0A0A6YYK1 113 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 FAM229AH3BQW9 127 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 SSNA1O43805 119 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 CIDEAO60543 219 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 OR10J3Q5JRS4 329 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
PABPC4-212ENST00000477556 GNG5P63218 68 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 RHOHQ15669 191 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 TVP23CQ96ET8 276 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 Q9HAA7 133 aa8.81□□□□□ -1
PABPC4-212ENST00000477556 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 RS1O15537 224 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 RAB2AP61019 212 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 ZNF876PQ49A33 203 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
PABPC4-212ENST00000477556 K7EQM0 130 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 HMGB3O15347 200 aaKnown RBP8.79□□□□□ -1
PABPC4-212ENST00000477556 HAMPP81172 84 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 LELP1Q5T871 98 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 CFAP126Q5VTH2 177 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 Q6ZSN1 163 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 Q8N814 137 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 OR10G9Q8NGN4 311 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 OR10G7Q8NGN6 311 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 SGK494Q96LW2 274 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 WFDC1Q9HC57 220 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 FAT1Q14517 4588 aa8.79□□□□□ -1
PABPC4-212ENST00000477556 TAAR5O14804 337 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 IGHV3-30P01768 117 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 IGHV3-33P01772 117 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 ARL14EPLP0DKL9 152 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 IGHV3-30-5P0DP03 117 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 CDC34P49427 236 aaPredicted RBP8.78□□□□□ -1
PABPC4-212ENST00000477556 IFITM3Q01628 133 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 C5orf17Q8NAS9 161 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 TM2D2Q9BX73 214 aa8.78□□□□□ -1
PABPC4-212ENST00000477556 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
PABPC4-212ENST00000477556 IGHV3-73A0A0B4J1V6 119 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 GCGP01275 180 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 TCRAP04437 139 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 MGST1P10620 155 aaKnown RBP8.77□□□□□ -1.01
PABPC4-212ENST00000477556 DEFA1P59665 94 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 DEFA3P59666 94 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 ZFP69Q49AA0 526 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 DPPA3Q6W0C5 159 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 SH3BGRL3Q9H299 93 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
PABPC4-212ENST00000477556 STAG3L2P0CL84 134 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 STAG3L3P0CL85 134 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
PABPC4-212ENST00000477556 LAGE3Q14657 143 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 PTH2Q96A98 100 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 C11orf21Q9P2W6 132 aa8.76□□□□□ -1.01
PABPC4-212ENST00000477556 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms