RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TRBV20OR9-2A0A075B6H5 130 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 CRISP2P16562 243 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 CDKN1BP46527 198 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 COX8CQ7Z4L0 72 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 TMEM208Q9BTX3 173 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
PTPN7-209ENST00000477554 AMBPP02760 352 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 HTN1P15515 57 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 RRN3P1Q2M238 152 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 Q6ZQT7 251 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 TVP23CQ96ET8 276 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 IGHV4-4A0A075B6R2 117 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 GPX1P07203 203 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 C8orf49Q96NF6 230 aa12.54□□□□□ -0.4
PTPN7-209ENST00000477554 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 MGST1P10620 155 aaKnown RBP12.53□□□□□ -0.4
PTPN7-209ENST00000477554 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-209ENST00000477554 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 LINC01587Q99440 93 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
PTPN7-209ENST00000477554 DNAH2Q9P225 4427 aa12.52□□□□□ -0.4
PTPN7-209ENST00000477554 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
PTPN7-209ENST00000477554 KLLNB2CW77 178 aa12.52□□□□□ -0.41
PTPN7-209ENST00000477554 GCGP01275 180 aa12.52□□□□□ -0.41
PTPN7-209ENST00000477554 LINC01551Q86U37 167 aa12.52□□□□□ -0.41
PTPN7-209ENST00000477554 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.41
PTPN7-209ENST00000477554 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
PTPN7-209ENST00000477554 HTN3P15516 51 aa12.51□□□□□ -0.41
PTPN7-209ENST00000477554 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
PTPN7-209ENST00000477554 PRR9Q5T870 116 aa12.51□□□□□ -0.41
PTPN7-209ENST00000477554 TMEM189A5PLL7 270 aa12.5□□□□□ -0.41
PTPN7-209ENST00000477554 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
PTPN7-209ENST00000477554 ADIRFQ15847 76 aa12.5□□□□□ -0.41
PTPN7-209ENST00000477554 TRAV12-3A0A0B4J271 114 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 C7orf71A4D174 169 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 K7EN84 100 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 PFN1P07737 140 aaKnown RBP12.49□□□□□ -0.41
PTPN7-209ENST00000477554 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 Q6AWC8 147 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 DAZAP1Q96EP5 407 aaKnown RBP12.49□□□□□ -0.41
PTPN7-209ENST00000477554 C20orf144Q9BQM9 153 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 BIRC6Q9NR09 4857 aa12.49□□□□□ -0.41
PTPN7-209ENST00000477554 BTN1A1Q13410 526 aa12.48□□□□□ -0.41
PTPN7-209ENST00000477554 APOC3P02656 99 aa12.47□□□□□ -0.41
PTPN7-209ENST00000477554 DEFB130BP0DP73 79 aa12.47□□□□□ -0.41
PTPN7-209ENST00000477554 DEFB130AP0DP74 79 aa12.47□□□□□ -0.41
PTPN7-209ENST00000477554 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-209ENST00000477554 OR5I1Q13606 314 aa12.47□□□□□ -0.41
PTPN7-209ENST00000477554 RNASE8Q8TDE3 154 aaKnown RBP12.47□□□□□ -0.41
PTPN7-209ENST00000477554 B4DEV8 164 aa12.46□□□□□ -0.41
PTPN7-209ENST00000477554 CRIP1P50238 77 aa12.46□□□□□ -0.41
PTPN7-209ENST00000477554 SVBPQ8N300 66 aa12.46□□□□□ -0.41
PTPN7-209ENST00000477554 ISOC2Q96AB3 205 aa12.46□□□□□ -0.41
PTPN7-209ENST00000477554 C19orf71A6NCJ1 209 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 M0R036 132 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 SH2D1AO60880 128 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 ZNF324O75467 553 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-209ENST00000477554 ERVFC1-1P60608 527 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 DAD1P61803 113 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
PTPN7-209ENST00000477554 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
PTPN7-209ENST00000477554 H7BYZ3 331 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 P01737 135 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 C15orf54Q8N8G6 183 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 SFRP2Q96HF1 295 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 OSTCQ9NRP0 149 aa12.45□□□□□ -0.42
PTPN7-209ENST00000477554 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 SNAPINO95295 136 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 S100A1P23297 94 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 TMEM88Q6PEY1 159 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
PTPN7-209ENST00000477554 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 FAT2Q9NYQ8 4349 aa12.44□□□□□ -0.42
PTPN7-209ENST00000477554 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
PTPN7-209ENST00000477554 CLRN3Q8NCR9 226 aa12.43□□□□□ -0.42
PTPN7-209ENST00000477554 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
PTPN7-209ENST00000477554 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
PTPN7-209ENST00000477554 ORM1P02763 201 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 MT-ND4LP03901 98 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms