RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
CLDN11-204ENST00000477531 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
CLDN11-204ENST00000477531 SDF2L1Q9HCN8 221 aa10.81□□□□□ -0.68
CLDN11-204ENST00000477531 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
CLDN11-204ENST00000477531 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 FXYD6-FXYD2A0A087WZ82 144 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 GNRH2O43555 120 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 CXorf1O96002 111 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 ORM1P02763 201 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 SFTA3P0C7M3 94 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 GCHFRP30047 84 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 TCTE3Q8IZS6 198 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 OR4C5Q8NGB2 326 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 TNFSF18Q9UNG2 199 aa10.8□□□□□ -0.68
CLDN11-204ENST00000477531 BORCS7-ASMTA0A0B4J1R7 106 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 G3V3Q6 166 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 ZFP69Q49AA0 526 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 Q5BKY6 102 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 TXNDC17Q9BRA2 123 aa10.79□□□□□ -0.68
CLDN11-204ENST00000477531 IGHV3-16A0A0C4DH30 117 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 C9JCJ5 164 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 K7EQD1 137 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 TAAR5O14804 337 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 TCRAP04437 139 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 TYMSP04818 313 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 GYPEP15421 78 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 LINC00315P59091 139 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
CLDN11-204ENST00000477531 SPATA12Q7Z6I5 190 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 TVP23CQ96ET8 276 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 SGK494Q96LW2 274 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 SH3BGRL3Q9H299 93 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
CLDN11-204ENST00000477531 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.68
CLDN11-204ENST00000477531 FBLL1A6NHQ2 334 aaKnown RBP10.77□□□□□ -0.69
CLDN11-204ENST00000477531 HMSDA8MTL9 139 aa10.77□□□□□ -0.69
CLDN11-204ENST00000477531 SMUG1Q53HV7 270 aa10.77□□□□□ -0.69
CLDN11-204ENST00000477531 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
CLDN11-204ENST00000477531 SMLR1H3BR10 107 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 EREGO14944 169 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 GCGP01275 180 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 FLI1Q01543 452 aaPredicted RBP10.76□□□□□ -0.69
CLDN11-204ENST00000477531 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 NFE4Q86UQ8 179 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
CLDN11-204ENST00000477531 RNF222A6NCQ9 220 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 ARPC5O15511 151 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 CDK2AP2O75956 126 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 C1QBP02746 253 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 EVI2AP22794 236 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 ZNF345Q14585 488 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 SAPCD1Q5SSQ6 148 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 RPL7L1Q6DKI1 246 aaKnown RBP10.75□□□□□ -0.69
CLDN11-204ENST00000477531 PRNTQ86SH4 94 aa10.75□□□□□ -0.69
CLDN11-204ENST00000477531 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 K7EP13 123 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 CIDEAO60543 219 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 IFNA7P01567 189 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
CLDN11-204ENST00000477531 PPT1P50897 306 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 ZNF876PQ49A33 203 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
CLDN11-204ENST00000477531 HSPG2P98160 4391 aa10.73□□□□□ -0.69
CLDN11-204ENST00000477531 A0A0D9SG52 128 aa10.73□□□□□ -0.69
CLDN11-204ENST00000477531 CTXND1A0A1B0GTU2 59 aa10.73□□□□□ -0.69
CLDN11-204ENST00000477531 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
CLDN11-204ENST00000477531 AKR1C8PQ5T2L2 129 aa10.73□□□□□ -0.69
CLDN11-204ENST00000477531 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
CLDN11-204ENST00000477531 RYR1P21817 5038 aa10.72□□□□□ -0.69
CLDN11-204ENST00000477531 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
CLDN11-204ENST00000477531 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
CLDN11-204ENST00000477531 OR11H4Q8NGC9 324 aa10.72□□□□□ -0.69
CLDN11-204ENST00000477531 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
CLDN11-204ENST00000477531 IGLV2-11P01706 119 aa10.71□□□□□ -0.69
CLDN11-204ENST00000477531 GATA1P15976 413 aaPredicted RBP10.71□□□□□ -0.69
CLDN11-204ENST00000477531 S100A4P26447 101 aaKnown RBP10.71□□□□□ -0.69
CLDN11-204ENST00000477531 Q6ZRN7 208 aaPredicted RBP10.71□□□□□ -0.69
CLDN11-204ENST00000477531 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.69
CLDN11-204ENST00000477531 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
CLDN11-204ENST00000477531 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
CLDN11-204ENST00000477531 RS1O15537 224 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 UBE2G2P60604 165 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 WFDC10BQ8IUB3 73 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 PGPEP1Q9NXJ5 209 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
CLDN11-204ENST00000477531 TRAV34A0A0B4J273 112 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 LOC100131303A0A0U1RQF7 123 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 KANTRA0A1W2PQU2 76 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 FABP5P3A8MUU1 101 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 PFDN1O60925 122 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 CRYGDP07320 174 aa10.69□□□□□ -0.7
CLDN11-204ENST00000477531 DNAH10OSP0CZ25 163 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms