RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 LITAFQ99732 161 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 NABP2Q9BQ15 211 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 FAM173AQ9BQD7 235 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 SRXN1Q9BYN0 137 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 TIMM8BQ9Y5J9 83 aaPredicted RBP3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 TRAV26-2A0A0B4J265 109 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGKV1-12A0A0C4DH73 117 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 A0A0U1RQV1 116 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 TEX49A0A1B0GTD5 131 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 A0A1W2PNU3 283 aaPredicted RBP3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 KNCNA6PVL3 124 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 C17orf100A8MU93 164 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 F8VRH5 84 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 INS-IGF2F8WCM5 200 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 CXCL13O43927 109 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 LYZL6O75951 148 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGKV1D-12P01611 117 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 COX6CP09669 75 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 DEFA4P12838 97 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 DUTP33316 252 aaKnown RBP3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF137PP52743 207 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 SYNJ2BPP57105 145 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF816Q0VGE8 651 aaPredicted RBP3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 PAPPA-AS1Q5QFB9 102 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 Q6ZRU5 148 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 VN1R4Q7Z5H5 301 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF714Q96N38 554 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 FOXC2Q99958 501 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 PAXXQ9BUH6 204 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 LSM7Q9UK45 103 aaKnown RBP3.34□□□□□ -1.87
PIKFYVE-209ENST00000477200 ADAMTS9Q9P2N4 1935 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 MPDZO75970 2070 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRBV7-6A0A0J9YX20 115 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 K7EMI3 77 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGHV3-33P01772 117 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 GFERP55789 205 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 ERVK-16P61578 105 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 LMO4P61968 165 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 FAM27E3Q08E93 113 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 PRR15Q8IV56 129 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 MKXQ8IYA7 352 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 RNF182Q8N6D2 247 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 ITLN1Q8WWA0 313 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 SSMEM1Q8WWF3 244 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 COX14Q96I36 57 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 FAM167A-AS1Q96KT0 104 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 RETNQ9HD89 108 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
PIKFYVE-209ENST00000477200 AGRNO00468 2067 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRBV19A0A075B6N1 114 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGKV1-27A0A075B6S5 117 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGKV1D-43A0A0B4J1Z2 117 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRAV40A0A0B4J280 105 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 TEX22C9J3V5 150 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 D6R8Y8 96 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 LMO7DNF2Z398 122 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 NDUFC1O43677 76 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 SCRG1O75711 98 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 CLLU1OSQ5K130 101 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 C10orf128Q5T292 105 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 Q6JHZ5 121 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 MRPL55Q7Z7F7 128 aaKnown RBP3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 SLC25A29Q8N8R3 303 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 ZNF799Q96GE5 643 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 TTTY13Q9BZ97 58 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 RPUSD1Q9UJJ7 312 aaKnown RBP3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 SLC25A15Q9Y619 301 aa3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 HEATR1Q9H583 2144 aaKnown RBP3.32□□□□□ -1.88
PIKFYVE-209ENST00000477200 MYO9BQ13459 2157 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRBV7-1A0A0A6YYK4 115 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 A0A0J9YY99 117 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 H7C423 109 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGHV3-30P01768 117 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGHV3-30-5P0DP03 117 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 COX6B1P14854 86 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 CKS2P33552 79 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 MRPL51Q4U2R6 128 aaKnown RBP3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 Q86TA4 180 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 TDHQ8IZJ6 230 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 UBALD1Q8TB05 177 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 WFDC5Q8TCV5 224 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 C10orf105Q8TEF2 133 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 TMEM263Q8WUH6 116 aaKnown RBP3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 S1PR3Q99500 378 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 TMEM243Q9BU79 118 aa3.31□□□□□ -1.88
PIKFYVE-209ENST00000477200 LOC389332A0A1B0GUA5 103 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms