RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 PAPPAQ13219 1627 aa-0.6□□□□□ -2.5
RPL39P34-201ENST00000477141 PLXNA2O75051 1894 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 ERCC6L2Q5T890 1561 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 SPTBN4Q9H254 2564 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PTPRGP23470 1445 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 UHRF1BP1Q6BDS2 1440 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CD109Q6YHK3 1445 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 ADGRL3Q9HAR2 1447 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TRBV6-1A0A0K0K1D8 114 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TCRBV3S1A0A5B6 114 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TMEM189A5PLL7 270 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 FABP12A6NFH5 140 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TRPC5OSA6NMA1 111 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 I3L2K1 104 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 NPFFO15130 113 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PDE6DO43924 150 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 EDF1O60869 148 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CNIH1O95406 144 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 IFNA21P01568 189 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 IFNA14P01570 189 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MT-ND6P03923 174 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MT1AP04731 61 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CALB1P05937 261 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 SERPINA6P08185 405 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 SAA1P0DJI8 122 aaPredicted RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CCL3L1P16619 93 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 NFYBP25208 207 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 POLR2JP52435 117 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TMBIM6P55061 237 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 HADHBP55084 474 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CARD18P57730 90 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 DEFA3P59666 94 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MRPS36P82909 103 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 SSBP1Q04837 148 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TAF1AQ15573 450 aaPredicted RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 DEFB112Q30KQ8 113 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PIGYQ3MUY2 71 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CLEC6AQ6EIG7 209 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CYP2G1PQ6ZSU1 146 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 C4orf33Q8N1A6 199 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 OTUD6BQ8N6M0 293 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 OR4S1Q8NGB4 309 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MAFIPQ8WZ33 124 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 C8orf76Q96K31 380 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 VPS25Q9BRG1 176 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 C7orf50Q9BRJ6 194 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PBDC1Q9BVG4 233 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TRIM4Q9C037 500 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 OR2H1Q9GZK4 316 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 FXYD6Q9H0Q3 95 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 CHMP4BQ9H444 224 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 LINC00472Q9H8W2 130 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PARVBQ9HBI1 364 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 IMP3Q9NV31 184 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MPC1Q9Y5U8 109 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 V9GYV3 84 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PKHD1L1Q86WI1 4243 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 KDM5AP29375 1690 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 USF3Q68DE3 2245 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 PRKDCP78527 4128 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MAP3K5Q99683 1374 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 LAMA2P24043 3122 aaKnown RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 MYO18BQ8IUG5 2567 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 WDR97A6NE52 1622 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 LRP5O75197 1615 aa-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 TNRC18O15417 2968 aaPredicted RBP-0.6□□□□□ -2.51
RPL39P34-201ENST00000477141 IFT172Q9UG01 1749 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 PHIPQ8WWQ0 1821 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 LOC107986453A0A1B0GWG9 222 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 TMEM210A6NLX4 147 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 CDC42EP2O14613 210 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 YKT6O15498 198 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 BCE1O60756 84 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 BANF1O75531 89 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 IFNA6P05013 189 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 S100A9P06702 114 aaKnown RBP-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 TPM2P07951 284 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 CXCL1P09341 107 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 HIST1H1EP10412 219 aaKnown RBP-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 TPT1P13693 172 aaKnown RBP-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 RPL35P42766 123 aaKnown RBP-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 HAMPP81172 84 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 POU6F1Q14863 301 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 FAM9CQ8IZT9 166 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 OR10X1Q8NGY0 326 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 NEK7Q8TDX7 302 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 PPDPFLQ8WWR9 84 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 CLEC2BQ92478 149 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 AP3S1Q92572 193 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 SDF2Q99470 211 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 SMIM7Q9BQ49 75 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 SIKE1Q9BRV8 207 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 OR2J1Q9GZK6 312 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 AGPAT3Q9NRZ7 376 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 UQCC1Q9NVA1 299 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 USE1Q9NZ43 259 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 MED11Q9P086 117 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 ASB4Q9Y574 426 aa-0.61□□□□□ -2.51
RPL39P34-201ENST00000477141 ATRQ13535 2644 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms