RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 DNAH10Q8IVF4 4471 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 FRAS1Q86XX4 4008 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 GGTLC3B5MD39 225 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 M0R2P5 195 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 CIDEAO60543 219 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 PFDN1O60925 122 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 IGHV3-53P01767 116 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 ORM1P02763 201 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 PFN1P07737 140 aaKnown RBP7.12□□□□□ -1.27
CCM2-208ENST00000476594 UBE2G1P62253 170 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
CCM2-208ENST00000476594 Q6ZR54 194 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 PRNTQ86SH4 94 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 KCNRGQ8N5I3 272 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 RASL10AQ92737 203 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 UPK3BQ9BT76 320 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 HHLA3Q9XRX5 114 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 MRPS16Q9Y3D3 137 aaKnown RBP7.12□□□□□ -1.27
CCM2-208ENST00000476594 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 ARL2-SNX15V9GYD0 113 aa7.12□□□□□ -1.27
CCM2-208ENST00000476594 TRAV4A0A0B4J268 109 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 A0A1W2PPQ1 181 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 GCGP01275 180 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 SEC11BP0C7V7 166 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
CCM2-208ENST00000476594 UBE2G2P60604 165 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 OR4C5Q8NGB2 326 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 ZNF471Q9BX82 626 aaPredicted RBP7.11□□□□□ -1.27
CCM2-208ENST00000476594 Q9H8V8 135 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 MDFICQ9P1T7 246 aa7.11□□□□□ -1.27
CCM2-208ENST00000476594 MUC4Q99102 2169 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 A0A096LPF7 62 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 C9JCJ5 164 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 G3V3Q6 166 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 PEX7O00628 323 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 BCL2L11O43521 198 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 TYMSP04818 313 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 S100A4P26447 101 aaKnown RBP7.1□□□□□ -1.27
CCM2-208ENST00000476594 SRIP30626 198 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 FHITP49789 147 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 FGF8P55075 233 aaPredicted RBP7.1□□□□□ -1.27
CCM2-208ENST00000476594 ZNF726P1Q15940 193 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 EIF5AL1Q6IS14 154 aaKnown RBP7.1□□□□□ -1.27
CCM2-208ENST00000476594 DPPA3Q6W0C5 159 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 Q6ZQT7 251 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 C6orf223Q8N319 242 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 FMC1Q96HJ9 113 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 VSIG2Q96IQ7 327 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 SGK494Q96LW2 274 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 TXNDC17Q9BRA2 123 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 ZFP30Q9Y2G7 519 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 NACAE9PAV3 2078 aa7.1□□□□□ -1.27
CCM2-208ENST00000476594 FAM74A7A6NL05 159 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 FABP5P3A8MUU1 101 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 SMLR1H3BR10 107 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 TEX46H3BTG2 121 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 RTL8CO15255 209 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 TPT1P13693 172 aaKnown RBP7.09□□□□□ -1.27
CCM2-208ENST00000476594 CRYBA4P53673 196 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 CST9LP1Q5W188 147 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 TVP23CQ96ET8 276 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 C8orf49Q96NF6 230 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 CYTL1Q9NRR1 136 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
CCM2-208ENST00000476594 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 SIVA1O15304 175 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 GNRH2O43555 120 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 S100A9P06702 114 aaKnown RBP7.08□□□□□ -1.28
CCM2-208ENST00000476594 AKR1C3P42330 323 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 FHL2Q14192 279 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 ESRGQ1W209 222 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 LGALSLQ3ZCW2 172 aaPredicted RBP7.08□□□□□ -1.28
CCM2-208ENST00000476594 ZNF876PQ49A33 203 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 Q86TA4 180 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 FAM213BQ8TBF2 198 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
CCM2-208ENST00000476594 K7EP13 123 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 SFTA3P0C7M3 94 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 ASIPP42127 132 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 RAB5CP51148 216 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 PTH2Q96A98 100 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
CCM2-208ENST00000476594 TRAV34A0A0B4J273 112 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 GYPEP15421 78 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
CCM2-208ENST00000476594 RHOHQ15669 191 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 PIK3CD-AS1Q5SR53 167 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
CCM2-208ENST00000476594 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms