RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 OR11H1Q8NG94 326 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ZNRF2Q8NHG8 242 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 MRPL30Q8TCC3 161 aaKnown RBP1.85□□□□□ -2.11
PTCD3-211ENST00000476215 C4orf3Q8WVX3 66 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 YPEL2Q96QA6 119 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF251Q9BRH9 671 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 C8orf4Q9NR00 106 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 FKBP14Q9NWM8 211 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 COMMD9Q9P000 198 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ABRACLQ9P1F3 81 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ERGIC3Q9Y282 383 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 LSM2Q9Y333 95 aaKnown RBP1.85□□□□□ -2.11
PTCD3-211ENST00000476215 EPPK1P58107 5090 aaKnown RBP1.85□□□□□ -2.11
PTCD3-211ENST00000476215 DNAH10Q8IVF4 4471 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM14DPA8MWL7 114 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 NDUFA3O95167 84 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 SCTP09683 121 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 UCHL1P09936 223 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 SAA2P0DJI9 122 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-211ENST00000476215 SULT1A2P50226 295 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 INSL3P51460 131 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 PSMD7P51665 324 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 AKR1C2P52895 323 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM267Q0VDI3 215 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-211ENST00000476215 HMGN3Q15651 99 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 HSD17B12Q53GQ0 312 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 PCOTHQ58A44 107 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 RPL39P5Q59GN2 51 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 CD200R1LQ6Q8B3 271 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM91Q6ZNR0 172 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 SBSPONQ8IVN8 264 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM203Q969S6 136 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 ARHGAP5-AS1Q96IT6 56 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 ABHD14BQ96IU4 210 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 TXNDC17Q9BRA2 123 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 MND1Q9BWT6 205 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 CST11Q9H112 138 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 LPAR5Q9H1C0 372 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 PLEKHJ1Q9NW61 149 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 SCN3BQ9NY72 215 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 AK3Q9UIJ7 227 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 JPT1Q9UK76 154 aa1.84□□□□□ -2.11
PTCD3-211ENST00000476215 TNCP24821 2201 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 HYDINQ4G0P3 5121 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 TRBV6-7A0A0A0MS04 114 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 A0A0J9YX75 114 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 KNCNA6PVL3 124 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 ARL6IP5O75915 188 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 CNIH1O95406 144 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 BRI3O95415 125 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 LGALS1P09382 135 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 GADD45AP24522 165 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 CD40LGP29965 261 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 MAP2K4P45985 399 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 RPS25P62851 125 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 FABP5Q01469 135 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 FXYD3Q14802 87 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 PLGLAQ15195 96 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 FAM229BQ4G0N7 80 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 CENPWQ5EE01 88 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 RBM48Q5RL73 367 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 UNQ5815/PRO19632Q6UWF5 114 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 TCTEX1D1Q8N7M0 179 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 LFNGQ8NES3 379 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 RNASE11Q8TAA1 199 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 OR4C12Q96R67 309 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 MGLLQ99685 303 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 CMSS1Q9BQ75 279 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 PECRQ9BY49 303 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 METTL1Q9UBP6 276 aaKnown RBP1.83□□□□□ -2.12
PTCD3-211ENST00000476215 TPRKBQ9Y3C4 175 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 DNAH2Q9P225 4427 aa1.83□□□□□ -2.12
PTCD3-211ENST00000476215 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 TRDV1A0A1B0GX56 115 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 ERICH4A6NGS2 130 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 H3BUA1 57 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 PDCD5O14737 125 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 IGLV1-51P01701 117 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 APOA2P02652 100 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 CRHBPP24387 322 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 SERPINB10P48595 397 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 CLDN12P56749 244 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 TPPP2P59282 170 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 HLA-DRB3P79483 266 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 MLLT11Q13015 90 aaPredicted RBP1.82□□□□□ -2.12
PTCD3-211ENST00000476215 Q6ZS49 121 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 TTC9CQ8N5M4 171 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 OR10J5Q8NHC4 309 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 GRPEL2Q8TAA5 225 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 USMG5Q96IX5 58 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 FAM103A1Q9BTL3 118 aaKnown RBP1.82□□□□□ -2.12
PTCD3-211ENST00000476215 GTSF1LQ9H1H1 148 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 PSORS1C2Q9UIG4 136 aa1.82□□□□□ -2.12
PTCD3-211ENST00000476215 HECTD4Q9Y4D8 3996 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms