RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 FAM19A4Q96LR4 140 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 VGLL1Q99990 258 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 RPP21Q9H633 154 aaKnown RBP5.22□□□□□ -1.57
SHQ1-207ENST00000475558 HLA-DRB4X5D2U9 266 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 TRAV8-1A0A0A6YYK1 113 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 SMIM27A0A1W2PRY6 76 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 A8MTW9 85 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 PRAC2D3DTV9 90 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 H3BMM0 161 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 J3KRW8 73 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 K7EN84 100 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 HLA-DMBP28068 263 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 ERCC8Q13216 396 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 OR5I1Q13606 314 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 PRR27Q6MZM9 219 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 ATP5L2Q7Z4Y8 100 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 OR2D3Q8NGH3 330 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 PYGO2Q9BRQ0 406 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 V9GYV3 84 aa5.21□□□□□ -1.58
SHQ1-207ENST00000475558 IZUMO1RA6ND01 250 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 KLLNB2CW77 178 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 ORM1P02763 201 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 MED14OSP0DP75 135 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 RIGQ13278 110 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 DNLZQ5SXM8 178 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 ATRAIDQ6UW56 229 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 FAM159AQ6UWV7 190 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 TMEM256Q8N2U0 113 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 ZC2HC1AQ96GY0 325 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 FAM210BQ96KR6 192 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 LINC00467Q9BRT7 94 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 MAP6D1Q9H9H5 199 aa5.2□□□□□ -1.58
SHQ1-207ENST00000475558 EPPK1P58107 5090 aaKnown RBP5.2□□□□□ -1.58
SHQ1-207ENST00000475558 SACSQ9NZJ4 4579 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 C7orf71A4D174 169 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 PGPEP1LA6NFU8 196 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 COLCA2A8K830 154 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 UBE2CO00762 179 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 MT-ND6P03923 174 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 TYMSP04818 313 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 RNASE4P34096 147 aaKnown RBP5.19□□□□□ -1.58
SHQ1-207ENST00000475558 CRIP1P50238 77 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 FAM3BP58499 235 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-207ENST00000475558 CACNG7P62955 275 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 ELOBQ15370 118 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 TDRG1Q3Y452 100 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 ACTL10Q5JWF8 245 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 SMIM15Q7Z3B0 74 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 FAM24BQ8N5W8 94 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 ZFAND2AQ8N6M9 145 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 GNB1LQ9BYB4 327 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
SHQ1-207ENST00000475558 SRD5A3Q9H8P0 318 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 TP53TG3Q9ULZ0 132 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
SHQ1-207ENST00000475558 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 KIR2DL5BA0A0G2JN68 375 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 KIR2DL5BA0A0G2JPC4 375 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 A0A1B0GUT8 65 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 SH2D1AO60880 128 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 ZNF324O75467 553 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-207ENST00000475558 RAB5AP20339 215 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 EDN2P20800 178 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 S100A4P26447 101 aaKnown RBP5.18□□□□□ -1.58
SHQ1-207ENST00000475558 PIK3CD-AS1Q5SR53 167 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 CASC10Q5T4H9 136 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 TMEM88Q6PEY1 159 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 KIR2DL5AQ8N109 375 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 NHLRC2Q8NBF2 726 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 KIR2DL5BQ8NHK3 375 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 MUC7Q8TAX7 377 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 FRZBQ92765 325 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 NDUFAF3Q9BU61 184 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 DNAH7Q8WXX0 4024 aa5.18□□□□□ -1.58
SHQ1-207ENST00000475558 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 HIGD1CA8MV81 97 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 A8MZ25 164 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 F6UB75 175 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 HLA-DQA1P01909 254 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 OR5AL1P0C617 328 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 ASIPP42127 132 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 APOC4P55056 127 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 ODF3L2Q3SX64 289 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 ANXA2RQ3ZCQ2 193 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 AMTNQ6UX39 209 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 ZNF493Q6ZR52 646 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
SHQ1-207ENST00000475558 FER1L6-AS1Q8NA97 138 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 Q8TAT8 98 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 GOLT1BQ9Y3E0 138 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 URGCP-MRPS24S4R325 110 aa5.17□□□□□ -1.58
SHQ1-207ENST00000475558 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
SHQ1-207ENST00000475558 IGHV4-4A0A075B6R2 117 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 IGHV1OR15-1A0A075B7D0 117 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 LCE6AA0A183 80 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms