RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 Q6ZUT4 128 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 OR4C16Q8NGL9 310 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 CBLN1P23435 193 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 PRCDQ00LT1 54 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 DEFB114Q30KQ6 69 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 Q6AWC8 147 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 SPSB3Q6PJ21 355 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 C21orf62Q9NYP8 219 aa8.69□□□□□ -1.02
HLA-DOB-208ENST00000475235 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 A0A087X0K7 114 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 ZNF727A8MUV8 499 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 ZNF253O75346 499 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 UBE2MP61081 183 aaKnown RBP8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 ERHP84090 104 aaKnown RBP8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 ZNF114Q8NC26 417 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 NMES1Q9C002 83 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 PLEKHA3Q9HB20 300 aa8.68□□□□□ -1.02
HLA-DOB-208ENST00000475235 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 IZUMO1RA6ND01 250 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 IFITM1P13164 125 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 Q8N976 141 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 OR51G1Q8NGK1 321 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 PPP1R1CQ8WVI7 109 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 TNCP24821 2201 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
HLA-DOB-208ENST00000475235 K7EIM0 57 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 IGKV1-5P01602 117 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 MFAP2P55001 183 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 FOXI1Q12951 378 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 Q56UQ5 140 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 UNQ9165/PRO28630Q6UXU0 137 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 GNPNAT1Q96EK6 184 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 SCGB3A2Q96PL1 93 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
HLA-DOB-208ENST00000475235 INS-IGF2F8WCM5 200 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 CCDC179H3BU77 68 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 NDUFA4O00483 81 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 SRP19P09132 144 aaKnown RBP8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 P0C879 139 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 SLC25A6P12236 298 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 GNG5P63218 68 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 PPP1R1AQ13522 171 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 SP6Q3SY56 376 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 LCN15Q6UWW0 184 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 CDIP1Q9H305 208 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 NAA60Q9H7X0 242 aa8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
HLA-DOB-208ENST00000475235 IGHV3-21A0A0B4J1V1 117 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 FABP2P12104 132 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 SUB1P53999 127 aaKnown RBP eCLIP8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 C18orf32Q8TCD1 76 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 I3L2K1 104 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 K7EMT4 169 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 CD7P09564 240 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 IZUMO4Q1ZYL8 232 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 MPV17L2Q567V2 206 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 CD164L2Q6UWJ8 174 aa8.64□□□□□ -1.03
HLA-DOB-208ENST00000475235 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 CRYM-AS1A6NIL9 109 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 C15orf62A8K5M9 175 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 CTSGP08311 255 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 LINC00694P0DN24 101 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 ADMP35318 185 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 KIAA1644Q3SXP7 199 aa8.63□□□□□ -1.03
HLA-DOB-208ENST00000475235 PIGBOS1A0A0B4J2F0 54 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 GCSHP23434 173 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 ID3Q02535 119 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 SPINK9Q5DT21 86 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 BORCS7Q96B45 105 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 LINC01587Q99440 93 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
HLA-DOB-208ENST00000475235 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 MUC21A0A0G2JKD1 596 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 A0A0G2JRQ6 117 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms