RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TMEM150CB9EJG8 249 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 H3BSH0 61 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 H3BVH4 76 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 IGLV3-1P01715 115 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 ZNF818PQ6ZRF7 136 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 Q6ZRU5 148 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 NDUFA11Q86Y39 141 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 LINC00311Q8N616 119 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 Q8N7P7 452 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 DCAF4L2Q8NA75 395 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-209ENST00000474157 SRXN1Q9BYN0 137 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 PLEKHA3Q9HB20 300 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 MED12LQ86YW9 2145 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 CELSR2Q9HCU4 2923 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 NAV3Q8IVL0 2385 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 SPG11Q96JI7 2443 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 IGKV1D-42A0A075B6H8 117 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 PGPA6NDG6 321 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 PEX7O00628 323 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 SPINT2O43291 252 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 CXCL13O43927 109 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 LTAP01374 205 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 GP9P14770 177 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 FKBP2P26885 142 aaKnown RBP5.62□□□□□ -1.51
GPNMB-209ENST00000474157 HILS1P60008 231 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
GPNMB-209ENST00000474157 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 TMEM155Q4W5P6 130 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 NEXN-AS1Q8NBZ9 246 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 FAM173AQ9BQD7 235 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 RETNQ9HD89 108 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 ZNF355PQ9NSJ1 428 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 AMMECR1Q9Y4X0 333 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-209ENST00000474157 BSNQ9UPA5 3926 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 KIAA2026Q5HYC2 2103 aa5.62□□□□□ -1.51
GPNMB-209ENST00000474157 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 KNCNA6PVL3 124 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 SRRM4A7MD48 611 aaKnown RBP5.61□□□□□ -1.51
GPNMB-209ENST00000474157 BUB3O43684 328 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 NGFP01138 241 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 GATA1P15976 413 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-209ENST00000474157 SLC25A16P16260 332 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 FCER1GP30273 86 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 TFF3Q07654 80 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 ZNF497Q6ZNH5 498 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 ADGRG4Q8IZF6 3080 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 BORCS8Q96FH0 119 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 UPK3BQ9BT76 320 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 PAXXQ9BUH6 204 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 CCL28Q9NRJ3 127 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 PEMTQ9UBM1 199 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 PRO1854Q9UHT4 67 aa5.61□□□□□ -1.51
GPNMB-209ENST00000474157 IGKV1-9A0A0C4DH69 117 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 LY6G6EA0A0G2JKS1 128 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 A0A0G2JRQ6 117 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 TRBV6-1A0A0K0K1D8 114 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 A0A1B0GUT8 65 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 C5orf63A6NC05 138 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 LMO7DNF2Z398 122 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 EFNA4P52798 201 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 EDDM3BP56851 147 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 PCBD1P61457 104 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 HERVK_113P61574 105 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 PAX8Q06710 450 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 FOXF2Q12947 444 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 ZNF793Q6ZN11 406 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 Q6ZR03 302 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 LINC00596Q86U02 117 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 RNF182Q8N6D2 247 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 C3orf56Q8N813 242 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 CALYQ9NYX4 217 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 KLK5Q9Y337 293 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-209ENST00000474157 U3KQA8 63 aa5.6□□□□□ -1.51
GPNMB-209ENST00000474157 KIF26BQ2KJY2 2108 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 HIVEP1P15822 2718 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 A0A096LNJ9 63 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-209ENST00000474157 TRAV12-1A0A0B4J245 112 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 TRBV7-6A0A0J9YX20 115 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 IGKV1-5P01602 117 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 P01737 135 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 P0C879 139 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 RPS27P42677 84 aaKnown RBP5.59□□□□□ -1.51
GPNMB-209ENST00000474157 EMDP50402 254 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 FAM104BQ5XKR9 115 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 GUSBP11Q6P575 273 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.51
GPNMB-209ENST00000474157 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 METTL26Q96S19 204 aa5.59□□□□□ -1.51
GPNMB-209ENST00000474157 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms