RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C1QTNF4Q9BXJ3 329 aa14.3□□□□□ -0.12
APP-215ENST00000474136 AGPAT4-IT1Q9H0P7 198 aa14.3□□□□□ -0.12
APP-215ENST00000474136 BIN3Q9NQY0 253 aa14.3□□□□□ -0.12
APP-215ENST00000474136 ZNF492Q9P255 531 aa14.3□□□□□ -0.12
APP-215ENST00000474136 HLA-DRB4X5D2U9 266 aa14.3□□□□□ -0.12
APP-215ENST00000474136 NACAE9PAV3 2078 aa14.3□□□□□ -0.12
APP-215ENST00000474136 TRAV34A0A0B4J273 112 aa14.29□□□□□ -0.12
APP-215ENST00000474136 LTAP01374 205 aa14.29□□□□□ -0.12
APP-215ENST00000474136 HTN3P15516 51 aa14.29□□□□□ -0.12
APP-215ENST00000474136 ZNF705AQ6ZN79 300 aaPredicted RBP14.29□□□□□ -0.12
APP-215ENST00000474136 PRNTQ86SH4 94 aa14.29□□□□□ -0.12
APP-215ENST00000474136 VGLL1Q99990 258 aa14.29□□□□□ -0.12
APP-215ENST00000474136 DERL1Q9BUN8 251 aa14.29□□□□□ -0.12
APP-215ENST00000474136 NAT8Q9UHE5 227 aa14.29□□□□□ -0.12
APP-215ENST00000474136 H3BMM0 161 aa14.28□□□□□ -0.12
APP-215ENST00000474136 TSPOP30536 169 aa14.28□□□□□ -0.12
APP-215ENST00000474136 NUTF2P61970 127 aaKnown RBP14.28□□□□□ -0.12
APP-215ENST00000474136 Q86TA4 180 aa14.28□□□□□ -0.12
APP-215ENST00000474136 IGHV3OR16-12A0A075B7B8 117 aa14.27□□□□□ -0.12
APP-215ENST00000474136 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.12
APP-215ENST00000474136 F6UB75 175 aa14.27□□□□□ -0.12
APP-215ENST00000474136 ZNF705DP0CH99 300 aaPredicted RBP14.27□□□□□ -0.12
APP-215ENST00000474136 ZNF705BP0CI00 300 aaPredicted RBP14.27□□□□□ -0.12
APP-215ENST00000474136 PNRC1Q12796 327 aaPredicted RBP14.27□□□□□ -0.12
APP-215ENST00000474136 ERCC8Q13216 396 aa14.27□□□□□ -0.12
APP-215ENST00000474136 CENPWQ5EE01 88 aa14.27□□□□□ -0.12
APP-215ENST00000474136 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.12
APP-215ENST00000474136 FAM222AQ5U5X8 452 aa14.27□□□□□ -0.12
APP-215ENST00000474136 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.12
APP-215ENST00000474136 NEU1Q99519 415 aa14.27□□□□□ -0.12
APP-215ENST00000474136 SCRT2Q9NQ03 307 aa14.27□□□□□ -0.12
APP-215ENST00000474136 DKK2Q9UBU2 259 aa14.27□□□□□ -0.12
APP-215ENST00000474136 A8MTW9 85 aa14.26□□□□□ -0.13
APP-215ENST00000474136 LEPP41159 167 aa14.26□□□□□ -0.13
APP-215ENST00000474136 FXYD7P58549 80 aa14.26□□□□□ -0.13
APP-215ENST00000474136 OR4B1Q8NGF8 309 aa14.26□□□□□ -0.13
APP-215ENST00000474136 IGF2BP2-AS1Q96M15 143 aa14.26□□□□□ -0.13
APP-215ENST00000474136 CARHSP1Q9Y2V2 147 aaKnown RBP14.26□□□□□ -0.13
APP-215ENST00000474136 TMEM189A5PLL7 270 aa14.25□□□□□ -0.13
APP-215ENST00000474136 GDF5OSQ5U4N7 250 aa14.25□□□□□ -0.13
APP-215ENST00000474136 TMEM88Q6PEY1 159 aa14.25□□□□□ -0.13
APP-215ENST00000474136 COX8CQ7Z4L0 72 aa14.25□□□□□ -0.13
APP-215ENST00000474136 TVP23CQ96ET8 276 aa14.25□□□□□ -0.13
APP-215ENST00000474136 SGK494Q96LW2 274 aa14.25□□□□□ -0.13
APP-215ENST00000474136 CT45A10P0DMU9 189 aa14.24□□□□□ -0.13
APP-215ENST00000474136 CRISP2P16562 243 aa14.24□□□□□ -0.13
APP-215ENST00000474136 DEFB1P60022 68 aa14.24□□□□□ -0.13
APP-215ENST00000474136 MLST8Q9BVC4 326 aa14.24□□□□□ -0.13
APP-215ENST00000474136 SDF2L1Q9HCN8 221 aa14.24□□□□□ -0.13
APP-215ENST00000474136 TRBV20OR9-2A0A075B6H5 130 aa14.23□□□□□ -0.13
APP-215ENST00000474136 IGKV3-20P01619 116 aa14.23□□□□□ -0.13
APP-215ENST00000474136 S100A1P23297 94 aa14.23□□□□□ -0.13
APP-215ENST00000474136 SMUG1Q53HV7 270 aa14.23□□□□□ -0.13
APP-215ENST00000474136 OCC1Q8TAD7 63 aa14.23□□□□□ -0.13
APP-215ENST00000474136 FAM19A4Q96LR4 140 aa14.23□□□□□ -0.13
APP-215ENST00000474136 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
APP-215ENST00000474136 LINC01551Q86U37 167 aa14.22□□□□□ -0.13
APP-215ENST00000474136 Q8TAT8 98 aa14.22□□□□□ -0.13
APP-215ENST00000474136 B4DEV8 164 aa14.21□□□□□ -0.13
APP-215ENST00000474136 GPX1P07203 203 aa14.21□□□□□ -0.13
APP-215ENST00000474136 ADCYAP1P18509 176 aa14.21□□□□□ -0.13
APP-215ENST00000474136 CDKN1BP46527 198 aa14.21□□□□□ -0.13
APP-215ENST00000474136 SVBPQ8N300 66 aa14.21□□□□□ -0.13
APP-215ENST00000474136 C6orf223Q8N319 242 aa14.21□□□□□ -0.13
APP-215ENST00000474136 IGLV2-8P01709 118 aa14.2□□□□□ -0.14
APP-215ENST00000474136 MGST1P10620 155 aaKnown RBP14.2□□□□□ -0.14
APP-215ENST00000474136 AMTNQ6UX39 209 aa14.2□□□□□ -0.14
APP-215ENST00000474136 NBDYA0A0U1RRE5 68 aa14.19□□□□□ -0.14
APP-215ENST00000474136 TEX48A0A1B0GUV7 120 aa14.19□□□□□ -0.14
APP-215ENST00000474136 GCGP01275 180 aa14.19□□□□□ -0.14
APP-215ENST00000474136 APOC3P02656 99 aa14.19□□□□□ -0.14
APP-215ENST00000474136 PRB4P10163 310 aaPredicted RBP14.19□□□□□ -0.14
APP-215ENST00000474136 RPL23P62829 140 aaKnown RBP14.19□□□□□ -0.14
APP-215ENST00000474136 ADIRFQ15847 76 aa14.19□□□□□ -0.14
APP-215ENST00000474136 DAZAP1Q96EP5 407 aaKnown RBP14.19□□□□□ -0.14
APP-215ENST00000474136 FABP5P3A8MUU1 101 aa14.18□□□□□ -0.14
APP-215ENST00000474136 KLLNB2CW77 178 aa14.18□□□□□ -0.14
APP-215ENST00000474136 SNAPINO95295 136 aa14.18□□□□□ -0.14
APP-215ENST00000474136 FAM3BP58499 235 aaPredicted RBP14.18□□□□□ -0.14
APP-215ENST00000474136 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
APP-215ENST00000474136 ZFAND2AQ8N6M9 145 aa14.18□□□□□ -0.14
APP-215ENST00000474136 PGPEP1LA6NFU8 196 aa14.17□□□□□ -0.14
APP-215ENST00000474136 ATP6V1G1O75348 118 aa14.17□□□□□ -0.14
APP-215ENST00000474136 FAM162BQ5T6X4 162 aa14.17□□□□□ -0.14
APP-215ENST00000474136 NHLRC2Q8NBF2 726 aa14.17□□□□□ -0.14
APP-215ENST00000474136 ZNRF2Q8NHG8 242 aa14.17□□□□□ -0.14
APP-215ENST00000474136 C8orf49Q96NF6 230 aa14.17□□□□□ -0.14
APP-215ENST00000474136 C20orf144Q9BQM9 153 aa14.17□□□□□ -0.14
APP-215ENST00000474136 TRAV21A0A0B4J279 112 aa14.16□□□□□ -0.14
APP-215ENST00000474136 M0R036 132 aa14.16□□□□□ -0.14
APP-215ENST00000474136 PFN1P07737 140 aaKnown RBP14.16□□□□□ -0.14
APP-215ENST00000474136 DAD1P61803 113 aa14.16□□□□□ -0.14
APP-215ENST00000474136 FAM231DQ6ZW35 169 aa14.16□□□□□ -0.14
APP-215ENST00000474136 C1orf158Q8N1D5 194 aa14.16□□□□□ -0.14
APP-215ENST00000474136 C15orf54Q8N8G6 183 aa14.16□□□□□ -0.14
APP-215ENST00000474136 ISOC2Q96AB3 205 aa14.16□□□□□ -0.14
APP-215ENST00000474136 ZC2HC1AQ96GY0 325 aa14.16□□□□□ -0.14
APP-215ENST00000474136 C7orf71A4D174 169 aa14.15□□□□□ -0.14
APP-215ENST00000474136 K7EN84 100 aa14.15□□□□□ -0.14
APP-215ENST00000474136 PPP1R2P9O14990 202 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms