RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TMEM75Q8N9X5 138 aa9.05□□□□□ -0.96
SHROOM3-204ENST00000473602 NKX6-2Q9C056 277 aaPredicted RBP9.05□□□□□ -0.96
SHROOM3-204ENST00000473602 IGLV2-18A0A075B6J9 118 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 KANTRA0A1W2PQU2 76 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 MAP1LC3B2A6NCE7 125 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 SEC11BP0C7V7 166 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 CCL18P55774 89 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 EIF5AP63241 154 aaKnown RBP9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 FLI1Q01543 452 aaPredicted RBP9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 SPXQ9BT56 116 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 MAP1LC3BQ9GZQ8 125 aa9.04□□□□□ -0.96
SHROOM3-204ENST00000473602 HERC1Q15751 4861 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 F6UZH7 168 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 BCL2L11O43521 198 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 TMEM183BQ1AE95 376 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 ZFP69Q49AA0 526 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 SAPCD1Q5SSQ6 148 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 TMEM183AQ8IXX5 376 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 SDF2L1Q9HCN8 221 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
SHROOM3-204ENST00000473602 FAM74A7A6NL05 159 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 IFNA7P01567 189 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 PPT1P50897 306 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 SLAQ13239 276 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 RASL10AQ92737 203 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 HIST1H2BAQ96A08 127 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 SGK494Q96LW2 274 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 TCEAL7Q9BRU2 100 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 ZNF471Q9BX82 626 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 MDFICQ9P1T7 246 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 ARL2-SNX15V9GYD0 113 aa9.02□□□□□ -0.97
SHROOM3-204ENST00000473602 A0A0J9YY99 117 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 GCGP01275 180 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 PFN1P07737 140 aaKnown RBP9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 UBE2G2P60604 165 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 SMUG1Q53HV7 270 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 DPPA3Q6W0C5 159 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 Q6ZR54 194 aa9.01□□□□□ -0.97
SHROOM3-204ENST00000473602 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 PEX7O00628 323 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 TYMSP04818 313 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 TPT1P13693 172 aaKnown RBP9□□□□□ -0.97
SHROOM3-204ENST00000473602 FHITP49789 147 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 SOHLH1Q5JUK2 328 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 PRNTQ86SH4 94 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 C8orf49Q96NF6 230 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 PRO0255Q9UI72 69 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
SHROOM3-204ENST00000473602 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
SHROOM3-204ENST00000473602 M0R2P5 195 aa8.99□□□□□ -0.97
SHROOM3-204ENST00000473602 TMUB2Q71RG4 321 aa8.99□□□□□ -0.97
SHROOM3-204ENST00000473602 TCTE3Q8IZS6 198 aa8.99□□□□□ -0.97
SHROOM3-204ENST00000473602 MBD3L1Q8WWY6 194 aa8.99□□□□□ -0.97
SHROOM3-204ENST00000473602 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
SHROOM3-204ENST00000473602 PAX4O43316 350 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 GNRH2O43555 120 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 ZNF80P51504 273 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 Q86TA4 180 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 FAM213BQ8TBF2 198 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
SHROOM3-204ENST00000473602 A0A096LPF7 62 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 TRAV34A0A0B4J273 112 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 C16orf90A8MZG2 172 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 IGHV3-53P01767 116 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 CRYBA4P53673 196 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 FHL2Q14192 279 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 LGALSLQ3ZCW2 172 aaPredicted RBP8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 EIF5AL1Q6IS14 154 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 SFT2D1Q8WV19 159 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 FMC1Q96HJ9 113 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 HHLA3Q9XRX5 114 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 ZFP30Q9Y2G7 519 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 MRPS16Q9Y3D3 137 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 ICOSQ9Y6W8 199 aa8.97□□□□□ -0.97
SHROOM3-204ENST00000473602 TRBV6-1A0A0K0K1D8 114 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 UBE2G1P62253 170 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 ESRGQ1W209 222 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 CST9LP1Q5W188 147 aa8.96□□□□□ -0.98
SHROOM3-204ENST00000473602 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms