RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 C16orf95Q9H693 158 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 FAM60AQ9NP50 221 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 BET1LQ9NYM9 111 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 C21orf62Q9NYP8 219 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 ZNF581Q9P0T4 197 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 CENPEQ02224 2701 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 IGLV11-55A0A075B6I3 123 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 IGLV3-10A0A075B6K4 115 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 C3orf85A0A1B0GTC6 90 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 SOD1P00441 154 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 C1QAP02745 245 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 IGKV1-16P04430 117 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 LINC00032P0C843 101 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 HOXB6P17509 224 aaKnown RBP4.16□□□□□ -1.74
RTF1-203ENST00000473214 CRISP3P54108 245 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 Q6AWC8 147 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 C7orf65Q6ZTY9 151 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 AMN1Q8IY45 258 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 RAB37Q96AX2 223 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 PKMYT1Q99640 499 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 OPRPNQ99935 248 aaPredicted RBP4.16□□□□□ -1.74
RTF1-203ENST00000473214 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 GABARAPL1Q9H0R8 117 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 LSM2Q9Y333 95 aaKnown RBP4.16□□□□□ -1.74
RTF1-203ENST00000473214 LINC00588Q9Y4M8 146 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 DNAJC15Q9Y5T4 150 aa4.16□□□□□ -1.74
RTF1-203ENST00000473214 HIVEP1P15822 2718 aa4.15□□□□□ -1.74
RTF1-203ENST00000473214 CSMD2Q7Z408 3487 aa4.15□□□□□ -1.74
RTF1-203ENST00000473214 PDZD2O15018 2839 aa4.15□□□□□ -1.74
RTF1-203ENST00000473214 MED13Q9UHV7 2174 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 TRBV20-1A0A075B6N2 111 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
RTF1-203ENST00000473214 EPM2AB3EWF7 344 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 H3BT86 120 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 BPY2O14599 106 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 HRASP01112 189 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 TRACP01848 142 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 IGHV4-34P06331 123 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 IGLC1P0CG04 106 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 ETV6P41212 452 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 LSM3P62310 102 aaKnown RBP4.15□□□□□ -1.75
RTF1-203ENST00000473214 C18orf65Q6ZTR6 163 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 MIR17HGQ75NE6 70 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 Q8N377 158 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 PSMF1Q92530 271 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 SAR1AQ9NR31 198 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 U3KQA8 63 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 AKAP9Q99996 3911 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 NUP210LQ5VU65 1888 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 TCHHQ07283 1943 aa4.15□□□□□ -1.75
RTF1-203ENST00000473214 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 A6NED7 52 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 TMEM262E9PQX1 116 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 C19orf84I3L1E1 186 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 IGLV3-19P01714 112 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 CISD3P0C7P0 127 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 TRAPPC2P0DI81 140 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 TRAPPC2BP0DI82 140 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 ZNF14P17017 642 aaPredicted RBP4.14□□□□□ -1.75
RTF1-203ENST00000473214 KISS1Q15726 138 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 KRTAP21-3Q3LHN1 58 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 Q6ZUT4 128 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 ZNF720Q7Z2F6 126 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 ZFAND2AQ8N6M9 145 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 LINC01006Q8NI28 216 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 C1orf147Q96MC9 270 aaPredicted RBP4.14□□□□□ -1.75
RTF1-203ENST00000473214 LINC00052Q96N35 136 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 MCEEQ96PE7 176 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 AQP10Q96PS8 301 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 XAGE1AQ9HD64 81 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
RTF1-203ENST00000473214 SDK2Q58EX2 2172 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 SCN2AQ99250 2005 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 MCRIP1C9JLW8 97 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 RPL36A-HNRNPH2H7BZ11 118 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 OR1I1O60431 355 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 CGB3P0DN86 165 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 CGB7P0DN87 165 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 PTHLHP12272 177 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 FXYD7P58549 80 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 NOXRED1Q6NXP6 359 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 KLHL30-AS1Q8NEE0 82 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 OTOSQ8NHW6 89 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 SCGB3A1Q96QR1 104 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 SLC35B3Q9H1N7 401 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 RPP21Q9H633 154 aaKnown RBP4.13□□□□□ -1.75
RTF1-203ENST00000473214 MTORP42345 2549 aa4.13□□□□□ -1.75
RTF1-203ENST00000473214 PCNX1Q96RV3 2341 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 A0A0D9SG52 128 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 OOSP1A8MZH6 123 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 C10orf142B7Z368 130 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 K7EM74 188 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 IGHV3-7P01780 117 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 RBP4P02753 201 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 CRYGAP11844 174 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms