RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TTC32Q5I0X7 151 aa10.84□□□□□ -0.67
MRPL55-226ENST00000473066 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
MRPL55-226ENST00000473066 TVP23CQ96ET8 276 aa10.84□□□□□ -0.67
MRPL55-226ENST00000473066 NKX6-2Q9C056 277 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-226ENST00000473066 KANTRA0A1W2PQU2 76 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 M0R2P5 195 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 GCGP01275 180 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 TYMSP04818 313 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 KCNRGQ8N5I3 272 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
MRPL55-226ENST00000473066 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 CYTL1Q9NRR1 136 aa10.83□□□□□ -0.68
MRPL55-226ENST00000473066 MRPS16Q9Y3D3 137 aaKnown RBP10.83□□□□□ -0.68
MRPL55-226ENST00000473066 A0A096LPF7 62 aa10.82□□□□□ -0.68
MRPL55-226ENST00000473066 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
MRPL55-226ENST00000473066 A0A0D9SG52 128 aa10.82□□□□□ -0.68
MRPL55-226ENST00000473066 EIF5AP63241 154 aaKnown RBP10.82□□□□□ -0.68
MRPL55-226ENST00000473066 ZNF471Q9BX82 626 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-226ENST00000473066 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
MRPL55-226ENST00000473066 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 HMSDA8MTL9 139 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 PEX7O00628 323 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 GNRH2O43555 120 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 PFDN1O60925 122 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
MRPL55-226ENST00000473066 ESRGQ1W209 222 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 OR4C5Q8NGB2 326 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 RASL10AQ92737 203 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 HIST1H2BAQ96A08 127 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 UPK3BQ9BT76 320 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 Q9H8V8 135 aa10.81□□□□□ -0.68
MRPL55-226ENST00000473066 FAM74A7A6NL05 159 aa10.8□□□□□ -0.68
MRPL55-226ENST00000473066 BCL2L11O43521 198 aa10.8□□□□□ -0.68
MRPL55-226ENST00000473066 SFTA3P0C7M3 94 aa10.8□□□□□ -0.68
MRPL55-226ENST00000473066 CRYBA4P53673 196 aa10.8□□□□□ -0.68
MRPL55-226ENST00000473066 FHL2Q14192 279 aa10.8□□□□□ -0.68
MRPL55-226ENST00000473066 MRPL23Q16540 153 aaKnown RBP10.8□□□□□ -0.68
MRPL55-226ENST00000473066 TRAV34A0A0B4J273 112 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 UMAD1C9J7I0 102 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 IGLV2-11P01706 119 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 SRIP30626 198 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-226ENST00000473066 UBE2G1P62253 170 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 Q86TA4 180 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 FAM213BQ8TBF2 198 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 ARL2-SNX15V9GYD0 113 aa10.79□□□□□ -0.68
MRPL55-226ENST00000473066 C9JCJ5 164 aa10.78□□□□□ -0.68
MRPL55-226ENST00000473066 ORM1P02763 201 aa10.78□□□□□ -0.68
MRPL55-226ENST00000473066 CST9LP1Q5W188 147 aa10.78□□□□□ -0.68
MRPL55-226ENST00000473066 TCEAL7Q9BRU2 100 aa10.78□□□□□ -0.68
MRPL55-226ENST00000473066 A0A1B0GVY2 172 aa10.77□□□□□ -0.69
MRPL55-226ENST00000473066 S100A4P26447 101 aaKnown RBP10.77□□□□□ -0.69
MRPL55-226ENST00000473066 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
MRPL55-226ENST00000473066 OR11H4Q8NGC9 324 aa10.77□□□□□ -0.69
MRPL55-226ENST00000473066 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
MRPL55-226ENST00000473066 A0A1W2PPQ1 181 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 FABP5P3A8MUU1 101 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 SIVA1O15304 175 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 TPT1P13693 172 aaKnown RBP10.76□□□□□ -0.69
MRPL55-226ENST00000473066 GYPEP15421 78 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 AKR1C3P42330 323 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 FHITP49789 147 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 DPPA3Q6W0C5 159 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 TXNDC17Q9BRA2 123 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
MRPL55-226ENST00000473066 NXPH4O95158 308 aa10.75□□□□□ -0.69
MRPL55-226ENST00000473066 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
MRPL55-226ENST00000473066 A0A1B0GV50 99 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 K7EQD1 137 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 CIDEAO60543 219 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 ASIPP42127 132 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 TMUB2Q71RG4 321 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 C9orf85Q96MD7 179 aa10.74□□□□□ -0.69
MRPL55-226ENST00000473066 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
MRPL55-226ENST00000473066 B4DEV8 164 aa10.73□□□□□ -0.69
MRPL55-226ENST00000473066 PAGE4O60829 102 aa10.73□□□□□ -0.69
MRPL55-226ENST00000473066 EIF5AL1Q6IS14 154 aaKnown RBP10.73□□□□□ -0.69
MRPL55-226ENST00000473066 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
MRPL55-226ENST00000473066 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
MRPL55-226ENST00000473066 RS1O15537 224 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 H2AFB1P0C5Y9 115 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 GATA1P15976 413 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-226ENST00000473066 BTF3P20290 206 aaKnown RBP10.72□□□□□ -0.69
MRPL55-226ENST00000473066 TNP2Q05952 138 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 ZNF506Q5JVG8 444 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 FAM162BQ5T6X4 162 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
MRPL55-226ENST00000473066 TEX46H3BTG2 121 aa10.71□□□□□ -0.69
MRPL55-226ENST00000473066 M0R036 132 aa10.71□□□□□ -0.69
MRPL55-226ENST00000473066 RHOHQ15669 191 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms