RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HTN1P15515 57 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 Q6ZQT7 251 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 Q86TA4 180 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 PCNPQ8WW12 178 aaKnown RBP6.53□□□□□ -1.36
SMC4-213ENST00000472282 TCEAL7Q9BRU2 100 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 NDFIP1Q9BT67 221 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
SMC4-213ENST00000472282 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.36
SMC4-213ENST00000472282 KMT2AQ03164 3969 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 FBLL1A6NHQ2 334 aaKnown RBP6.52□□□□□ -1.37
SMC4-213ENST00000472282 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
SMC4-213ENST00000472282 BCL2P10415 239 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 AZU1P20160 251 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 EMP1P54849 157 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 TAS2R60P59551 318 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 UBE2G1P62253 170 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 Q6AWC8 147 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 LGALS9CQ6DKI2 356 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 PYGO2Q9BRQ0 406 aa6.52□□□□□ -1.37
SMC4-213ENST00000472282 TMEM189A5PLL7 270 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 GCGP01275 180 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 MEF2BQ02080 365 aaPredicted RBP6.51□□□□□ -1.37
SMC4-213ENST00000472282 MUC21Q5SSG8 566 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 ZNF767PQ75MW2 155 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 LYPD6BQ8NI32 183 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
SMC4-213ENST00000472282 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 TXNDC17Q9BRA2 123 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 NACAE9PAV3 2078 aa6.51□□□□□ -1.37
SMC4-213ENST00000472282 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 TRAV21A0A0B4J279 112 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 ZNF80P51504 273 aaPredicted RBP6.5□□□□□ -1.37
SMC4-213ENST00000472282 TMEM183BQ1AE95 376 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 SAPCD1Q5SSQ6 148 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 Q6ZTC4 211 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 EIF4E3Q8N5X7 224 aaKnown RBP6.5□□□□□ -1.37
SMC4-213ENST00000472282 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
SMC4-213ENST00000472282 C11orf52Q96A22 123 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 VAX2Q9UIW0 290 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 NAGKQ9UJ70 344 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 KLF12Q9Y4X4 402 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 MUC4Q99102 2169 aa6.5□□□□□ -1.37
SMC4-213ENST00000472282 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 CBY3A6NI87 242 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 IGLL5B9A064 214 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 LTAP01374 205 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 TAGLN2P37802 199 aaKnown RBP6.49□□□□□ -1.37
SMC4-213ENST00000472282 RPL35P42766 123 aaKnown RBP6.49□□□□□ -1.37
SMC4-213ENST00000472282 TOR2AQ5JU69 321 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 ZNF493Q6ZR52 646 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 NHLRC2Q8NBF2 726 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 ZC2HC1AQ96GY0 325 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 DERL1Q9BUN8 251 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 TP53TG3Q9ULZ0 132 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 DNAH6Q9C0G6 4158 aa6.49□□□□□ -1.37
SMC4-213ENST00000472282 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 RBFOX3A6NFN3 312 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 SNURFLB1AK76 121 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 PDE6DO43924 150 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 S100A9P06702 114 aaKnown RBP6.48□□□□□ -1.37
SMC4-213ENST00000472282 PFN1P07737 140 aaKnown RBP6.48□□□□□ -1.37
SMC4-213ENST00000472282 SPART-AS1P0CW21 52 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 ANXA2RQ3ZCQ2 193 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 ZNF506Q5JVG8 444 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 FAM159AQ6UWV7 190 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 NOP10Q9NPE3 64 aaKnown RBP6.48□□□□□ -1.37
SMC4-213ENST00000472282 MED9Q9NWA0 146 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 ZFP30Q9Y2G7 519 aa6.48□□□□□ -1.37
SMC4-213ENST00000472282 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
SMC4-213ENST00000472282 IGHV4-4A0A075B6R2 117 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 TYMSP04818 313 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 DAD1P61803 113 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 TDRG1Q3Y452 100 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 CENPWQ5EE01 88 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 COX8CQ7Z4L0 72 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 BAGE2Q86Y30 109 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 TMEM183AQ8IXX5 376 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 C11orf72Q8NBR9 251 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 EIF5A2Q9GZV4 153 aaKnown RBP6.47□□□□□ -1.37
SMC4-213ENST00000472282 GSN-AS1Q9NRJ2 163 aa6.47□□□□□ -1.37
SMC4-213ENST00000472282 TRGV11A0A075B6L2 103 aa6.46□□□□□ -1.38
SMC4-213ENST00000472282 TRAV10A0A0B4J240 114 aa6.46□□□□□ -1.38
SMC4-213ENST00000472282 RAB19A4D1S5 217 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms