RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 USF3Q68DE3 2245 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 IGHV7-81A0A0B4J1V7 117 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 IGF1P05019 195 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 Q5BKY6 102 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 NFE4Q86UQ8 179 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 VOPP1Q96AW1 172 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 TRAV10A0A0B4J240 114 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 TMEM131Q92545 1883 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 NMBP08949 121 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 DAZ2Q13117 558 aaKnown RBP6.69□□□□□ -1.34
CD47-204ENST00000471694 DAZ4Q86SG3 579 aaKnown RBP6.69□□□□□ -1.34
CD47-204ENST00000471694 DAZ3Q9NR90 486 aaKnown RBP6.69□□□□□ -1.34
CD47-204ENST00000471694 LAMTOR2Q9Y2Q5 125 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 SPTBN1Q01082 2364 aaKnown RBP6.69□□□□□ -1.34
CD47-204ENST00000471694 SMR3AQ99954 134 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 HLA-DMBP28068 263 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 TMEM14EPQ6UXP3 125 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 KIR2DL5BQ8NHK3 375 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 GFI1Q99684 422 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
CD47-204ENST00000471694 FREM3P0C091 2139 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 RLFQ13129 1914 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 PRSS46E5RG02 174 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
CD47-204ENST00000471694 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 LINC00482Q8N8I6 264 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 HAMPP81172 84 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 ZNF491Q8N8L2 437 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 VSIG2Q96IQ7 327 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 RNF126Q9BV68 326 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 CD300CQ08708 224 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 TRAV13-2A0A0B4J235 113 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 TMEM89A2RUT3 159 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 STPG4Q8N801 248 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 COX11Q9Y6N1 276 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 C15orf65H3BRN8 121 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 NCR3O14931 201 aa6.68□□□□□ -1.34
CD47-204ENST00000471694 A0A1W2PNU3 283 aaPredicted RBP6.67□□□□□ -1.34
CD47-204ENST00000471694 A6NDX4 124 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 PHF3Q92576 2039 aaKnown RBP6.67□□□□□ -1.34
CD47-204ENST00000471694 P0DMU3 169 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 FAM231AP0DMU4 169 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 FAM231CP0DMU5 169 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 SLC25A29Q8N8R3 303 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 ZGRF1Q86YA3 2104 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 LRRK1Q38SD2 2015 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 Q8N9W7 124 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 GTF3C1Q12789 2109 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 MPDZO75970 2070 aa6.67□□□□□ -1.34
CD47-204ENST00000471694 TNFRSF13BO14836 293 aaPredicted RBP6.66□□□□□ -1.34
CD47-204ENST00000471694 UBE2D3P61077 147 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 Q8N8P6 123 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 HELZP42694 1942 aaKnown RBP6.66□□□□□ -1.34
CD47-204ENST00000471694 IGKV1-17P01599 117 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 IGHG4P01861 327 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 FBXL19-AS1Q494R0 122 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 FHL1Q13642 323 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 J3QRE1 110 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 DYNAPQ8N1N2 210 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 TMEM14CQ9P0S9 112 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 A0A0G2JRQ6 117 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.34
CD47-204ENST00000471694 HIST2H2BDQ6DRA6 164 aa6.66□□□□□ -1.34
CD47-204ENST00000471694 LTAP01374 205 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 Q6ZS49 121 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 MPV17L2Q567V2 206 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 PRO0255Q9UI72 69 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 KMT2EQ8IZD2 1858 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 IGLC1P0CG04 106 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 SIRPDQ9H106 197 aa6.65□□□□□ -1.34
CD47-204ENST00000471694 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 HSD52Q0P140 79 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 MAP6D1Q9H9H5 199 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 LINC01551Q86U37 167 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 SAMD5Q5TGI4 173 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 FAM222AQ5U5X8 452 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 TMEM263Q8WUH6 116 aaKnown RBP6.65□□□□□ -1.35
CD47-204ENST00000471694 UBL5Q9BZL1 73 aa6.65□□□□□ -1.35
CD47-204ENST00000471694 CADP27708 2225 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 IGHG2P01859 326 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 SPAG11BQ08648 103 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 C16orf54Q6UWD8 224 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 RITA1Q96K30 269 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 FAM186AA6NE01 2351 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 RNF222A6NCQ9 220 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 DOPEY2Q9Y3R5 2298 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 NPSP0C0P6 89 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 PRR20EP86478 221 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 PRR20CP86479 221 aa6.64□□□□□ -1.35
CD47-204ENST00000471694 PRR20DP86480 221 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms