RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SAMD5Q5TGI4 173 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 CBLN2Q8IUK8 224 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 PYGO2Q9BRQ0 406 aa7.18□□□□□ -1.26
CCM2-204ENST00000470837 NOTCH3Q9UM47 2321 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 TRAV9-1A0A075B6T8 112 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 IGHV3OR16-12A0A075B7B8 117 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 IGHV1OR15-1A0A075B7D0 117 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KIR2DL5BA0A0G2JN68 375 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KIR2DL5BA0A0G2JPC4 375 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 HIGD1CA8MV81 97 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 IGHV4-30-4P0DP06 118 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KRTAP10-11P60412 298 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KIR3DS1Q14943 382 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KIR2DL5AQ8N109 375 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 Q8N1Y9 231 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.17□□□□□ -1.26
CCM2-204ENST00000470837 FER1L6-AS1Q8NA97 138 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 NEU1Q99519 415 aa7.17□□□□□ -1.26
CCM2-204ENST00000470837 GRIFINA4D1Z8 144 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 F2Z2F3 143 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 UBE2CO00762 179 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 CRXO43186 299 aaPredicted RBP7.16□□□□□ -1.26
CCM2-204ENST00000470837 ZNF324O75467 553 aaPredicted RBP7.16□□□□□ -1.26
CCM2-204ENST00000470837 CXCL1P09341 107 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 GZMBP10144 247 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 FAM3BP58499 235 aaPredicted RBP7.16□□□□□ -1.26
CCM2-204ENST00000470837 PGLYRP4Q96LB8 373 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
CCM2-204ENST00000470837 VWFP04275 2813 aa7.16□□□□□ -1.26
CCM2-204ENST00000470837 IGKV3D-20A0A0C4DH25 116 aa7.15□□□□□ -1.26
CCM2-204ENST00000470837 S100A8P05109 93 aa7.15□□□□□ -1.26
CCM2-204ENST00000470837 RIGQ13278 110 aa7.15□□□□□ -1.26
CCM2-204ENST00000470837 SPANXN1Q5VSR9 72 aa7.15□□□□□ -1.26
CCM2-204ENST00000470837 A0A1B0GUT8 65 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 A0A1B0GW15 77 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 SPINK4O60575 86 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 FOXA3P55318 350 aaPredicted RBP7.14□□□□□ -1.27
CCM2-204ENST00000470837 CACNG7P62955 275 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 ZNF415Q09FC8 603 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 ELOBQ15370 118 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 TDRG1Q3Y452 100 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 COX19Q49B96 90 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 Q6ZQT7 251 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 ATP5L2Q7Z4Y8 100 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 NUP35Q8NFH5 326 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 FAM210BQ96KR6 192 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
CCM2-204ENST00000470837 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 A8MZ25 164 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 H3BVH4 76 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 GNRH2O43555 120 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 TYMSP04818 313 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 OR5AL1P0C617 328 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 ARMS2P0C7Q2 107 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 RAB4BP61018 213 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 SSTP61278 116 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 HBBP68871 147 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 RRN3P1Q2M238 152 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 MRPL54Q6P161 138 aaKnown RBP7.13□□□□□ -1.27
CCM2-204ENST00000470837 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 GTSF1Q8WW33 167 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 SORL1Q92673 2214 aa7.13□□□□□ -1.27
CCM2-204ENST00000470837 SNURFLB1AK76 121 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 TWIST1Q15672 202 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 DEFB121Q5J5C9 76 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 DNLZQ5SXM8 178 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 KPRPQ5T749 579 aaPredicted RBP7.12□□□□□ -1.27
CCM2-204ENST00000470837 RASL11AQ6T310 242 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 C1orf158Q8N1D5 194 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 C16orf74Q96GX8 76 aa7.12□□□□□ -1.27
CCM2-204ENST00000470837 IGHV3-16A0A0C4DH30 117 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 SMIM9A6NGZ8 99 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 M0R381 172 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 GIG44P09565 113 aaPredicted RBP7.11□□□□□ -1.27
CCM2-204ENST00000470837 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 RBMY1A1P0DJD3 496 aaKnown RBP7.11□□□□□ -1.27
CCM2-204ENST00000470837 RBMY1CP0DJD4 496 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 RAB5AP20339 215 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 CTRLP40313 264 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 RPS10P46783 165 aaKnown RBP7.11□□□□□ -1.27
CCM2-204ENST00000470837 CAMPP49913 170 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 RBMY1FQ15415 496 aaKnown RBP7.11□□□□□ -1.27
CCM2-204ENST00000470837 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 Q6ZWC4 215 aa7.11□□□□□ -1.27
CCM2-204ENST00000470837 TMEM263Q8WUH6 116 aaKnown RBP7.11□□□□□ -1.27
CCM2-204ENST00000470837 SPXQ9BT56 116 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms