RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 CKS2P33552 79 aa12.73□□□□□ -0.37
SMARCD3-206ENST00000470588 DEFB1P60022 68 aa12.73□□□□□ -0.37
SMARCD3-206ENST00000470588 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
SMARCD3-206ENST00000470588 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
SMARCD3-206ENST00000470588 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-206ENST00000470588 ACANP16112 2415 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 KIR2DL5BA0A0G2JN68 375 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 KIR2DL5BA0A0G2JPC4 375 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 C2orf70A6NJV1 201 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 K7EQG2 157 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 CTAG1AP78358 180 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 KIR2DL5AQ8N109 375 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 VAMP8Q9BV40 100 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
SMARCD3-206ENST00000470588 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 SNRPD3P62318 126 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 Q6ZQT7 251 aa12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 SMIM15Q7Z3B0 74 aa12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 C4orf3Q8WVX3 66 aa12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 AP5S1Q9NUS5 200 aa12.71□□□□□ -0.37
SMARCD3-206ENST00000470588 LINC01619G3V211 115 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 LEPROTL1O95214 131 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 PMCHL1Q16048 86 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 KHDC1LQ5JSQ8 128 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 ODF3Q96PU9 254 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 C16orf95Q9H693 158 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.38
SMARCD3-206ENST00000470588 J3KRW8 73 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 MED14OSP0DP75 135 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 WFDC12Q8WWY7 111 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 DPF1Q92782 380 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 TMEM70Q9BUB7 260 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 HSPB8Q9UJY1 196 aa12.7□□□□□ -0.38
SMARCD3-206ENST00000470588 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 OR10AG1Q8NH19 301 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 KLLNB2CW77 178 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 LEPP41159 167 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 TFPI2P48307 235 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 TCTEX1D4Q5JR98 221 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 OR1N2Q8NGR9 330 aa12.69□□□□□ -0.38
SMARCD3-206ENST00000470588 LOC389332A0A1B0GUA5 103 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 INAFM1C9JVW0 142 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 CRXO43186 299 aaPredicted RBP12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 TCF21O43680 179 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 ZNF688P0C7X2 276 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 ASIPP42127 132 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 SLURP1P55000 103 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 C18orf65Q6ZTR6 163 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 C14orf144Q96I85 54 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
SMARCD3-206ENST00000470588 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
SMARCD3-206ENST00000470588 A0A0J9YX75 114 aa12.67□□□□□ -0.38
SMARCD3-206ENST00000470588 NPYP01303 97 aa12.67□□□□□ -0.38
SMARCD3-206ENST00000470588 ADAMTSL5Q6ZMM2 481 aa12.67□□□□□ -0.38
SMARCD3-206ENST00000470588 SMKR1H3BMG3 65 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 H3BVH4 76 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 NDUFA7O95182 113 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 MAP1LC3AQ9H492 121 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 PAM16Q9Y3D7 125 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 SYS1-DBNDD2H3BUS1 97 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
SMARCD3-206ENST00000470588 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 EVI2AP22794 236 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 KLHL30-AS1Q8NEE0 82 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 LINC01006Q8NI28 216 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
SMARCD3-206ENST00000470588 OTOGQ6ZRI0 2925 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 C20orf202A1L168 122 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 NCR2O95944 276 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 TSPOP30536 169 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 OR9G4Q8NGQ1 327 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 ANK3Q12955 4377 aaKnown RBP12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 C7orf71A4D174 169 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 GNRH2O43555 120 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 NXT2Q9NPJ8 142 aaKnown RBP12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 TIMM8BQ9Y5J9 83 aaPredicted RBP12.64□□□□□ -0.39
SMARCD3-206ENST00000470588 PRSS47A8MTI9 375 aa12.63□□□□□ -0.39
SMARCD3-206ENST00000470588 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
SMARCD3-206ENST00000470588 FOXI2Q6ZQN5 318 aa12.63□□□□□ -0.39
SMARCD3-206ENST00000470588 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms