RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 DYNC2LI1Q8TCX1 351 aa5.97□□□□□ -1.45
CCDC171-204ENST00000470191 DAZAP1Q96EP5 407 aaKnown RBP5.97□□□□□ -1.45
CCDC171-204ENST00000470191 DNAJC30Q96LL9 226 aa5.97□□□□□ -1.45
CCDC171-204ENST00000470191 UQCC1Q9NVA1 299 aa5.97□□□□□ -1.45
CCDC171-204ENST00000470191 TMEM14CQ9P0S9 112 aa5.97□□□□□ -1.45
CCDC171-204ENST00000470191 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 TRAV8-3A0A0A6YYJ7 113 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 M0R2P5 195 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 IGLV2-11P01706 119 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 NBEAP1P0C6P0 100 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 FGF7P21781 194 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 ASIPP42127 132 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 RPL29P47914 159 aaKnown RBP5.96□□□□□ -1.46
CCDC171-204ENST00000470191 ZNF266Q14584 549 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 LAGE3Q14657 143 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
CCDC171-204ENST00000470191 MIR17HGQ75NE6 70 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 ATP6V0E2Q8NHE4 81 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 PHYHIPLQ96FC7 376 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 SLC25A2Q9BXI2 301 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 C20orf85Q9H1P6 137 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 RPH3ALQ9UNE2 315 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 WDR83OSQ9Y284 106 aa5.96□□□□□ -1.46
CCDC171-204ENST00000470191 FAM25EA8MYX2 175 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 GGTLC3B5MD39 225 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 CSN1S1P47710 185 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 VWC2Q2TAL6 325 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 TDRG1Q3Y452 100 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 Q8N976 141 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 GTSF1LQ9H1H1 148 aa5.95□□□□□ -1.46
CCDC171-204ENST00000470191 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 F6UZH7 168 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 TYMSP04818 313 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 RANP62826 216 aaKnown RBP5.94□□□□□ -1.46
CCDC171-204ENST00000470191 GAGE1Q13065 139 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 GAGE4Q13068 117 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 GAGE5Q13069 117 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 RHOHQ15669 191 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 Q6AWC8 147 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 HYLS1Q96M11 299 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 PAXXQ9BUH6 204 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 OR51M1Q9H341 326 aa5.94□□□□□ -1.46
CCDC171-204ENST00000470191 RNF222A6NCQ9 220 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 OR7C2O60412 319 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 INPP1P49441 399 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 S100A10P60903 97 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 ASAH1Q13510 395 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 ZNF876PQ49A33 203 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 DPPA3Q6W0C5 159 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 FAM167A-AS1Q96KT0 104 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 SLIRPQ9GZT3 109 aaKnown RBP5.93□□□□□ -1.46
CCDC171-204ENST00000470191 V9GYH0 126 aa5.93□□□□□ -1.46
CCDC171-204ENST00000470191 TRBV7-9A0A0J9YWB2 115 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 IGSF23A1L1A6 192 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 NDUFB6O95139 128 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 ODF1Q14990 250 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 TOR2AQ5JU69 321 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 THAP6Q8TBB0 222 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 FXYD5Q96DB9 178 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 RMI2Q96E14 147 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 ATP5SQ99766 215 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 MRPS26Q9BYN8 205 aaKnown RBP5.92□□□□□ -1.46
CCDC171-204ENST00000470191 SDF2L1Q9HCN8 221 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 KLK12Q9UKR0 248 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 URGCP-MRPS24S4R325 110 aa5.92□□□□□ -1.46
CCDC171-204ENST00000470191 RBAKDNA6NC62 111 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 EIF3GO75821 320 aaKnown RBP eCLIP5.91□□□□□ -1.46
CCDC171-204ENST00000470191 S100A11P31949 105 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 ASB13Q8WXK3 278 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 UBE2WQ96B02 151 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 BCL7BQ9BQE9 202 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
CCDC171-204ENST00000470191 TRAV8-1A0A0A6YYK1 113 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 PGPEP1LA6NFU8 196 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 NOL3O60936 208 aaKnown RBP5.9□□□□□ -1.46
CCDC171-204ENST00000470191 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.46
CCDC171-204ENST00000470191 SULT1A1P50225 295 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 UBE2L3P68036 154 aaKnown RBP5.9□□□□□ -1.46
CCDC171-204ENST00000470191 HBG1P69891 147 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 HBG2P69892 147 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 SPANXN2Q5MJ10 180 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 STX12Q86Y82 276 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 OR2T35Q8NGX2 323 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 SGK494Q96LW2 274 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 NMES1Q9C002 83 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 C11orf1Q9H5F2 150 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 Q9UF83 564 aa5.9□□□□□ -1.46
CCDC171-204ENST00000470191 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
CCDC171-204ENST00000470191 H3BMQ9 156 aa5.89□□□□□ -1.47
CCDC171-204ENST00000470191 MGST1P10620 155 aaKnown RBP5.89□□□□□ -1.47
CCDC171-204ENST00000470191 S100A5P33763 92 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms