RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TDRG1Q3Y452 100 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 DPPA3Q6W0C5 159 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 Q8N3U1 123 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 SMIM3Q9BZL3 60 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 C17orf112F2Z3M2 114 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 K7EP13 123 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
HDAC3-204ENST00000469207 GNG5P63218 68 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 WFDC2Q14508 124 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 GOLT1AQ6ZVE7 132 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 Q8N814 137 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 NMES1Q9C002 83 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 MBD2Q9UBB5 411 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
HDAC3-204ENST00000469207 PPT1P50897 306 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 H2BFSP57053 126 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 OR10J3Q5JRS4 329 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 Q6ZSN1 163 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 C10orf126Q8N4M7 172 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 ATP5SQ99766 215 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 CCDC32Q9BV29 185 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 C11orf21Q9P2W6 132 aa8.17□□□□□ -1.1
HDAC3-204ENST00000469207 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 ZNF80P51504 273 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-204ENST00000469207 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 CMTM2Q8TAZ6 248 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 PPP1R1CQ8WVI7 109 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 TREM1Q9NP99 234 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
HDAC3-204ENST00000469207 FBLL1A6NHQ2 334 aaKnown RBP8.15□□□□□ -1.1
HDAC3-204ENST00000469207 IFITM3Q01628 133 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 ASAH1Q13510 395 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 ZNF876PQ49A33 203 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 KHDC3LQ587J8 217 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 CFAP126Q5VTH2 177 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 SDF2L1Q9HCN8 221 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 HSPB11Q9Y547 144 aa8.15□□□□□ -1.1
HDAC3-204ENST00000469207 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 PGPEP1LA6NFU8 196 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 J3QL48 77 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 LECT2O14960 151 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 RS1O15537 224 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 TIRAPP58753 221 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 TAS2R45P59539 299 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 RAB2AP61019 212 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 SCGB1C1Q8TD33 95 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 NTN5Q8WTR8 489 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-204ENST00000469207 ASB13Q8WXK3 278 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 Q9UF83 564 aa8.14□□□□□ -1.11
HDAC3-204ENST00000469207 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
HDAC3-204ENST00000469207 MPC2O95563 127 aa8.13□□□□□ -1.11
HDAC3-204ENST00000469207 PFN1P07737 140 aaKnown RBP8.13□□□□□ -1.11
HDAC3-204ENST00000469207 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
HDAC3-204ENST00000469207 SH2D6Q7Z4S9 175 aa8.13□□□□□ -1.11
HDAC3-204ENST00000469207 ENKURQ8TC29 256 aa8.13□□□□□ -1.11
HDAC3-204ENST00000469207 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-204ENST00000469207 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 CYCSP99999 105 aaKnown RBP8.12□□□□□ -1.11
HDAC3-204ENST00000469207 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 LELP1Q5T871 98 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 PRADC1Q9BSG0 188 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
HDAC3-204ENST00000469207 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GCGP01275 180 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GAGE1Q13065 139 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GAGE4Q13068 117 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GAGE5Q13069 117 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 RHOHQ15669 191 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-204ENST00000469207 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 ZNF506Q5JVG8 444 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
HDAC3-204ENST00000469207 OR10G9Q8NGN4 311 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 OR10G7Q8NGN6 311 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 JPT2Q9H910 190 aa8.11□□□□□ -1.11
HDAC3-204ENST00000469207 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
HDAC3-204ENST00000469207 IGLV2-11P01706 119 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 PQLC2Q6ZP29 291 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 NDUFA13Q9P0J0 144 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 PSG8Q9UQ74 426 aa8.1□□□□□ -1.11
HDAC3-204ENST00000469207 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms