RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CARD19Q96LW7 228 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 PBOV1Q9GZY1 135 aa1.91□□□□□ -2.1
LSM5-209ENST00000468872 MPDZO75970 2070 aa1.9□□□□□ -2.1
LSM5-209ENST00000468872 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.1
LSM5-209ENST00000468872 IGHV3-64A0A075B6Q5 118 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 FABP5P3A8MUU1 101 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 ZNF705FA8MVS1 300 aaPredicted RBP1.9□□□□□ -2.11
LSM5-209ENST00000468872 ARPC5O15511 151 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 CCL4P13236 92 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 RAB4BP61018 213 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 HIST1H4AP62805 103 aaKnown RBP1.9□□□□□ -2.11
LSM5-209ENST00000468872 TMEM128Q5BJH2 165 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 TOMM20LQ6UXN7 152 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 TMEM35BQ8NCS4 154 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 WFDC5Q8TCV5 224 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 SLAMF6Q96DU3 332 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 PBDC1Q9BVG4 233 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 FREM1Q5H8C1 2179 aa1.9□□□□□ -2.11
LSM5-209ENST00000468872 A0A0J9YW62 118 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 H3BT86 120 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 M0R378 163 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 AIPO00170 330 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 SCGB1A1P11684 91 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 DEFA4P12838 97 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 RNASE4P34096 147 aaKnown RBP1.89□□□□□ -2.11
LSM5-209ENST00000468872 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
LSM5-209ENST00000468872 INSL3P51460 131 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 AP1S1P61966 158 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 S100A12P80511 92 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 AKR1C1Q04828 323 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 RRN3P1Q2M238 152 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 LYZL1Q6UWQ5 148 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 ZNF705AQ6ZN79 300 aaPredicted RBP1.89□□□□□ -2.11
LSM5-209ENST00000468872 LRRC28Q86X40 367 aaPredicted RBP1.89□□□□□ -2.11
LSM5-209ENST00000468872 NUP35Q8NFH5 326 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 FDCSPQ8NFU4 85 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 PFN4Q8NHR9 129 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 STAG3L4Q8TBR4 150 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 IMUPQ9GZP8 106 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 CCDC171Q6TFL3 1326 aa1.89□□□□□ -2.11
LSM5-209ENST00000468872 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 NCKAP5O14513 1909 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 RIIAD1A6NNX1 92 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 KPNA4O00629 521 aaPredicted RBP1.88□□□□□ -2.11
LSM5-209ENST00000468872 BANF1O75531 89 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 PPBPP02775 128 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 CLPSP04118 112 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 S100GP29377 79 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 CASP1P29466 404 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 TPI1P60174 286 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 SUPT4H1P63272 117 aaKnown RBP1.88□□□□□ -2.11
LSM5-209ENST00000468872 SPANXN3Q5MJ09 141 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 RPP25LQ8N5L8 163 aaKnown RBP1.88□□□□□ -2.11
LSM5-209ENST00000468872 C11orf40Q8WZ69 217 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 MALSU1Q96EH3 234 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
LSM5-209ENST00000468872 GPX7Q96SL4 187 aaPredicted RBP1.88□□□□□ -2.11
LSM5-209ENST00000468872 EFCAB11Q9BUY7 163 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 OR52A1Q9UKL2 312 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 PCTPQ9UKL6 214 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 ERGIC3Q9Y282 383 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 NUP210LQ5VU65 1888 aa1.88□□□□□ -2.11
LSM5-209ENST00000468872 DNAH6Q9C0G6 4158 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 A0A087WX48 190 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 DUXBA0A1W2PPF3 345 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 IRGMA1A4Y4 181 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 H7BYZ3 331 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 PGLYRP1O75594 196 aaPredicted RBP1.87□□□□□ -2.11
LSM5-209ENST00000468872 CR1P17927 2039 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 RPL7P18124 248 aaKnown RBP1.87□□□□□ -2.11
LSM5-209ENST00000468872 RPS3P23396 243 aaKnown RBP eCLIP1.87□□□□□ -2.11
LSM5-209ENST00000468872 TMEM258P61165 79 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 RELAQ04206 551 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 SLC38A11Q08AI6 406 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 SAMD13Q5VXD3 122 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
LSM5-209ENST00000468872 THEM6Q8WUY1 208 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 DYDC1Q8WWB3 177 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 CCDC115Q96NT0 180 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 TMEM70Q9BUB7 260 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 REG4Q9BYZ8 158 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 LRP1BQ9NZR2 4599 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 ASB4Q9Y574 426 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 TIMM9Q9Y5J7 89 aa1.87□□□□□ -2.11
LSM5-209ENST00000468872 MDC1Q14676 2089 aaKnown RBP1.86□□□□□ -2.11
LSM5-209ENST00000468872 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 IGHV1-18A0A0C4DH31 117 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 TMEM212A6NML5 194 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 C1orf196B1AJZ1 125 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 TAX1BP3O14907 124 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 DHFRP00374 187 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 APODP05090 189 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 MSMBP08118 114 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 POLR2HP52434 150 aaKnown RBP1.86□□□□□ -2.11
LSM5-209ENST00000468872 SCGB2B2Q4G0G5 96 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 LYRM7Q5U5X0 104 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 MIR17HGQ75NE6 70 aa1.86□□□□□ -2.11
LSM5-209ENST00000468872 BPIFA4PQ86YQ2 179 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms