RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 ZNF876PQ49A33 203 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 ENHOQ6UWT2 76 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 Q6ZRG5 221 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 C12orf45Q8N5I9 185 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-207ENST00000468612 SMIM4Q8WVI0 70 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 DPH3Q96FX2 82 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 Q9UF83 564 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 A0A087WX48 190 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 SSSCA1O60232 199 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 NCS1P62166 190 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 TMEM128Q5BJH2 165 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-207ENST00000468612 MIC13Q5XKP0 118 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 PFDN5Q99471 154 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 ATP5SQ99766 215 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 GGACTQ9BVM4 153 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
NEDD9-207ENST00000468612 ANKRD20A5PA0PJZ0 165 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 CTDSPLO15194 276 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 CAMLGP49069 296 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 CAV2P51636 162 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 CNBPP62633 177 aaKnown RBP6.91□□□□□ -1.3
NEDD9-207ENST00000468612 SRSF9Q13242 221 aaKnown RBP eCLIP6.91□□□□□ -1.3
NEDD9-207ENST00000468612 SLC39A9Q9NUM3 307 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 LENEPQ9Y5L5 61 aa6.91□□□□□ -1.3
NEDD9-207ENST00000468612 DIRC3C9JPN6 131 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 VAMP1P23763 118 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 VBP1P61758 197 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 NRARPQ7Z6K4 114 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 SAMD10Q9BYL1 202 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 GPN1Q9HCN4 374 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-207ENST00000468612 SDF2L1Q9HCN8 221 aa6.9□□□□□ -1.3
NEDD9-207ENST00000468612 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 PGPA6NDG6 321 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 SFT2D2O95562 160 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 ZNF506Q5JVG8 444 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 GTSF1Q8WW33 167 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 PTH2Q96A98 100 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 LINC00479Q96M42 142 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 MIXL1Q9H2W2 232 aa6.89□□□□□ -1.31
NEDD9-207ENST00000468612 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 PGPEP1LA6NFU8 196 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 TAAR5O14804 337 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 TSC22D2O75157 780 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 NBEAP1P0C6P0 100 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 RPL29P47914 159 aaKnown RBP6.88□□□□□ -1.31
NEDD9-207ENST00000468612 FGF8P55075 233 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-207ENST00000468612 TAS2R30P59541 319 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 KCNIP4Q6PIL6 250 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 CLRN3Q8NCR9 226 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 AP3S1Q92572 193 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 KCNS1Q96KK3 526 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 SLC25A2Q9BXI2 301 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 C20orf85Q9H1P6 137 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 PARLQ9H300 379 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 MCUBQ9NWR8 336 aa6.88□□□□□ -1.31
NEDD9-207ENST00000468612 CRPP02741 224 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 PPP1R1AQ13522 171 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-207ENST00000468612 OR2T35Q8NGX2 323 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 TMED6Q8WW62 240 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 ASB13Q8WXK3 278 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 WDR83OSQ9Y284 106 aa6.87□□□□□ -1.31
NEDD9-207ENST00000468612 H7C1H1 209 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 SLPIP03973 132 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 CSN1S1P47710 185 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 MIAQ16674 131 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 C15orf54Q8N8G6 183 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
NEDD9-207ENST00000468612 MUC21A0A0G2JKD1 596 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 SMIM18P0DKX4 95 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 UFSP1Q6NVU6 142 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 OR10G7Q8NGN6 311 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
NEDD9-207ENST00000468612 FAM231BA6NCW3 169 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 F6UZH7 168 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 CCSO14618 274 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 MPV17L2Q567V2 206 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 GCSAMLQ5JQS6 135 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 TVP23CQ96ET8 276 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.31
NEDD9-207ENST00000468612 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-207ENST00000468612 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 C7orf66A4D0T2 115 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 A8MWV9 139 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 ANGP03950 147 aaKnown RBP6.83□□□□□ -1.32
NEDD9-207ENST00000468612 TCRBP04435 133 aa6.83□□□□□ -1.32
NEDD9-207ENST00000468612 RNASE3P12724 160 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms