RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 BSNQ9UPA5 3926 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRAV41A0A0B4J266 112 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 LOC107986453A0A1B0GWG9 222 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRDV1A0A1B0GX56 115 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 GRIFINA4D1Z8 144 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 GGT3PA6NGU5 568 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 FABP5P3A8MUU1 101 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 GABARAPH6UMI1 98 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 IFNA4P05014 189 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 INAFM2P0DMQ5 153 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 SLC25A16P16260 332 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 SRIP30626 198 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 DSCR4P56555 118 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 MEF2BQ02080 365 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 HSD17B12Q53GQ0 312 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 HAGHLQ6PII5 290 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 HRCT1Q6UXD1 115 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF705AQ6ZN79 300 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 BPIFA4PQ86YQ2 179 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR4S1Q8NGB4 309 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 OTOSQ8NHW6 89 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 RPS4Y2Q8TD47 263 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF714Q96N38 554 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 GPX7Q96SL4 187 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 ATG5Q9H1Y0 275 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 LINC00574Q9H8X3 128 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 TAF9BQ9HBM6 251 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF586Q9NXT0 402 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 IL36BQ9NZH7 164 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 BAIAP2Q9UQB8 552 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 V9GYH0 126 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 KALRNO60229 2985 aa2.32□□□□□ -2.04
HMGB1P25-201ENST00000468402 DCHS2Q6V1P9 2916 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 ACACAQ13085 2346 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRGV5A0A0B4J1U4 118 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 H3BMG7 143 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 SLC25A20O43772 301 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR2T1O43869 369 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 SH2D1AO60880 128 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 SIX6O95475 246 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 LHBP01229 141 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 IL7P13232 177 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 NPPCP23582 126 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 AKR1D1P51857 326 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 VMA21Q3ZAQ7 101 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 GLYATL3Q5SZD4 288 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM244Q5VVB8 128 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 EIF5AL1Q6IS14 154 aaKnown RBP2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 LINC00305Q7Z4B0 112 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 TERB2Q8NHR7 220 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 POP5Q969H6 163 aaKnown RBP2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM106AQ96A25 262 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 TM2D3Q9BRN9 247 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 ADAT1Q9BUB4 502 aaKnown RBP2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 XAGE1AQ9HD64 81 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 OSTCQ9NRP0 149 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR5AC2Q9NZP5 309 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR5V1Q9UGF6 321 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 BOKQ9UMX3 212 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 R4GMQ9 66 aa2.31□□□□□ -2.04
HMGB1P25-201ENST00000468402 ARID1AO14497 2285 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 APC2O95996 2303 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRGV10A0A0A0MS01 117 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRAV40A0A0B4J280 105 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 LOC102725191A0A1B0GVB3 256 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM235A6NFC5 223 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 NDUFB3O43676 98 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 CREBL2O60519 120 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 MRPL33O75394 65 aaKnown RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF324O75467 553 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 NAPSAO96009 420 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 PMP2P02689 132 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 GPX1P07203 203 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 IFI6P09912 130 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 FGF7P21781 194 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 EIF2B2P49770 351 aaKnown RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 TSPEAR-AS2P59090 65 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 GNG2P59768 71 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 KRTAP10-12P60413 245 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 UBE2BP63146 152 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SLC38A11Q08AI6 406 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 HES1Q14469 280 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 LGALSLQ3ZCW2 172 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 MRPL51Q4U2R6 128 aaKnown RBP2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SPRNQ5BIV9 151 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 PABPC1L2AQ5JQF8 200 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 DPPA3Q6W0C5 159 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SH2D6Q7Z4S9 175 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 PRR15Q8IV56 129 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 S100ZQ8WXG8 99 aa2.3□□□□□ -2.04
HMGB1P25-201ENST00000468402 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms