RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 IGHV3-16A0A0C4DH30 117 aa14.24□□□□□ -0.13
COL9A3-207ENST00000467819 CRYGDP07320 174 aa14.24□□□□□ -0.13
COL9A3-207ENST00000467819 KRTAP10-1P60331 282 aa14.24□□□□□ -0.13
COL9A3-207ENST00000467819 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 TRAV21A0A0B4J279 112 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 K7EP13 123 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 TYMSP04818 313 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 GNG5P63218 68 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 NHLRC2Q8NBF2 726 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 TVP23CQ96ET8 276 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 WFDC1Q9HC57 220 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 TREM1Q9NP99 234 aa14.23□□□□□ -0.13
COL9A3-207ENST00000467819 A0A1W2PPV4 95 aa14.22□□□□□ -0.13
COL9A3-207ENST00000467819 HMGB3O15347 200 aaKnown RBP14.22□□□□□ -0.13
COL9A3-207ENST00000467819 RAB2AP61019 212 aa14.22□□□□□ -0.13
COL9A3-207ENST00000467819 ACOT6Q3I5F7 207 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-207ENST00000467819 PQLC2Q6ZP29 291 aa14.22□□□□□ -0.13
COL9A3-207ENST00000467819 MARVELD1Q9BSK0 173 aa14.22□□□□□ -0.13
COL9A3-207ENST00000467819 SDF2L1Q9HCN8 221 aa14.22□□□□□ -0.13
COL9A3-207ENST00000467819 C10orf126Q8N4M7 172 aa14.21□□□□□ -0.13
COL9A3-207ENST00000467819 HERC1Q15751 4861 aa14.21□□□□□ -0.14
COL9A3-207ENST00000467819 DMBT1Q9UGM3 2413 aaPredicted RBP14.21□□□□□ -0.14
COL9A3-207ENST00000467819 INAFM2P0DMQ5 153 aa14.2□□□□□ -0.14
COL9A3-207ENST00000467819 GATA1P15976 413 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-207ENST00000467819 PPT1P50897 306 aa14.2□□□□□ -0.14
COL9A3-207ENST00000467819 SGK494Q96LW2 274 aa14.2□□□□□ -0.14
COL9A3-207ENST00000467819 Q5VSD8 79 aa14.19□□□□□ -0.14
COL9A3-207ENST00000467819 SH2D6Q7Z4S9 175 aa14.19□□□□□ -0.14
COL9A3-207ENST00000467819 ASB13Q8WXK3 278 aa14.19□□□□□ -0.14
COL9A3-207ENST00000467819 KCNS1Q96KK3 526 aa14.19□□□□□ -0.14
COL9A3-207ENST00000467819 IGHV3-38A0A0C4DH36 116 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 GCSHP23434 173 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 OR10G9Q8NGN4 311 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 OR10G7Q8NGN6 311 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 FRZBQ92765 325 aa14.18□□□□□ -0.14
COL9A3-207ENST00000467819 FBLL1A6NHQ2 334 aaKnown RBP14.17□□□□□ -0.14
COL9A3-207ENST00000467819 PSCAO43653 123 aa14.17□□□□□ -0.14
COL9A3-207ENST00000467819 ARL14EPLP0DKL9 152 aa14.17□□□□□ -0.14
COL9A3-207ENST00000467819 NDFIP1Q9BT67 221 aa14.17□□□□□ -0.14
COL9A3-207ENST00000467819 VPS13BQ7Z7G8 4022 aa14.17□□□□□ -0.14
COL9A3-207ENST00000467819 TIRAPP58753 221 aa14.16□□□□□ -0.14
COL9A3-207ENST00000467819 ZNF876PQ49A33 203 aa14.16□□□□□ -0.14
COL9A3-207ENST00000467819 SMR3BP02814 79 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-207ENST00000467819 CDC34P49427 236 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-207ENST00000467819 DEFA1P59665 94 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 DEFA3P59666 94 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 HAMPP81172 84 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 SLC25A29Q8N8R3 303 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 Q9HAA7 133 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 C11orf21Q9P2W6 132 aa14.15□□□□□ -0.14
COL9A3-207ENST00000467819 IGHV3-73A0A0B4J1V6 119 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 ZNF80P51504 273 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-207ENST00000467819 LINC01556Q5JQF7 62 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 OR10J3Q5JRS4 329 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 CFAP126Q5VTH2 177 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 DPPA3Q6W0C5 159 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
COL9A3-207ENST00000467819 IGLV5-52A0A0A0MRZ9 124 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 TRAV8-6A0A0B4J262 113 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 RS1O15537 224 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 PFN1P07737 140 aaKnown RBP14.13□□□□□ -0.15
COL9A3-207ENST00000467819 RHOHQ15669 191 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 TMEM75Q8N9X5 138 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 C5orf17Q8NAS9 161 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 HSD17B11Q8NBQ5 300 aa14.13□□□□□ -0.15
COL9A3-207ENST00000467819 FLG2Q5D862 2391 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-207ENST00000467819 SERTM2A0A1B0GWG4 89 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 LRCOL1A6NCL2 159 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 GCGP01275 180 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 IGHV3-30P01768 117 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 IGHV3-33P01772 117 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 TCRAP04437 139 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 STAG3L2P0CL84 134 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 STAG3L3P0CL85 134 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 IGHV3-30-3P0DP02 117 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 IGHV3-30-5P0DP03 117 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 PSG8Q9UQ74 426 aa14.12□□□□□ -0.15
COL9A3-207ENST00000467819 IBA57-AS1B1ANH7 110 aa14.11□□□□□ -0.15
COL9A3-207ENST00000467819 SRRM2Q9UQ35 2752 aaKnown RBP14.11□□□□□ -0.15
COL9A3-207ENST00000467819 MYCBP2O75592 4640 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 TRBV6-4A0A1B0GX49 114 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 K7EQM0 130 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 TAAR5O14804 337 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 GCHFRP30047 84 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 ZNF506Q5JVG8 444 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 RAB24Q969Q5 203 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 C9orf85Q96MD7 179 aa14.1□□□□□ -0.15
COL9A3-207ENST00000467819 PGPEP1LA6NFU8 196 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 A6NHS1 94 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 CIDEAO60543 219 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 ZFP69Q49AA0 526 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 SMUG1Q53HV7 270 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 LELP1Q5T871 98 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 PRNTQ86SH4 94 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 OR2G3Q8NGZ4 309 aa14.09□□□□□ -0.15
COL9A3-207ENST00000467819 NTN5Q8WTR8 489 aaPredicted RBP14.09□□□□□ -0.15
COL9A3-207ENST00000467819 DNAH8Q96JB1 4490 aa14.08□□□□□ -0.16
COL9A3-207ENST00000467819 SUMO1P63165 101 aaKnown RBP14.08□□□□□ -0.16
COL9A3-207ENST00000467819 FLI1Q01543 452 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms