RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 MANBALQ9NQG1 85 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 TRAV1-1A0A0B4J248 108 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 IGHV3-53P01767 116 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 TYMSP04818 313 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 PFN1P07737 140 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 LINC00476Q8WZB0 136 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
SHROOM3-202ENST00000466541 NACAE9PAV3 2078 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 NUDT3O95989 172 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 IFNA1P01562 189 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 ORM1P02763 201 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 IBA57Q5T440 356 aaKnown RBP8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 TCEAL7Q9BRU2 100 aa8.49□□□□□ -1.05
SHROOM3-202ENST00000466541 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 A0A0J9YY99 117 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 M0R036 132 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 SPINK4O60575 86 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 ZFP30Q9Y2G7 519 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 RYR3Q15413 4870 aa8.48□□□□□ -1.05
SHROOM3-202ENST00000466541 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 FABP5P3A8MUU1 101 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 SH2D1AO60880 128 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 LTAP01374 205 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 S100A9P06702 114 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 HOXA5P20719 270 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 RPL35P42766 123 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 TCTAP57738 103 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 TDRG1Q3Y452 100 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 BAGE2Q86Y30 109 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 DERL1Q9BUN8 251 aa8.47□□□□□ -1.05
SHROOM3-202ENST00000466541 ALMS1Q8TCU4 4167 aa8.46□□□□□ -1.05
SHROOM3-202ENST00000466541 TRAV26-1A0A087WT03 109 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 GRIFINA4D1Z8 144 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 B4DEV8 164 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 C9JCJ5 164 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 BCL2P10415 239 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 CRIP1P50238 77 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 LGALS9BQ3B8N2 356 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 LGALS9CQ6DKI2 356 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 PRR27Q6MZM9 219 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 SPXQ9BT56 116 aa8.46□□□□□ -1.06
SHROOM3-202ENST00000466541 RAB19A4D1S5 217 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 M0R2P5 195 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 SFTA3P0C7M3 94 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 MED9Q9NWA0 146 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 VAX2Q9UIW0 290 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 MUC4Q99102 2169 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 RYR2Q92736 4967 aa8.45□□□□□ -1.06
SHROOM3-202ENST00000466541 HYDINQ4G0P3 5121 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 IGKV3D-20A0A0C4DH25 116 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 TRGV4A0A0C4DH28 118 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 TRBV6-1A0A0K0K1D8 114 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 PDE6DO43924 150 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 ASIPP42127 132 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 CEBPGP53567 150 aa8.44□□□□□ -1.06
SHROOM3-202ENST00000466541 SACSQ9NZJ4 4579 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 RBFOX3A6NFN3 312 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 KRBOX1C9JBD0 128 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 H3BVH4 76 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 P0DMU3 169 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 FAM231AP0DMU4 169 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 FAM231CP0DMU5 169 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 GNG4P50150 75 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 ZNF674Q2M3X9 581 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 OR4C5Q8NGB2 326 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 C11orf52Q96A22 123 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
SHROOM3-202ENST00000466541 IGHV3-73A0A0B4J1V6 119 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 PAX4O43316 350 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 RPL19P84098 196 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 ZNF479Q96JC4 524 aa8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 EIF5A2Q9GZV4 153 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-202ENST00000466541 TAGLN2P37802 199 aaKnown RBP8.41□□□□□ -1.06
SHROOM3-202ENST00000466541 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
SHROOM3-202ENST00000466541 TEX261Q6UWH6 196 aa8.41□□□□□ -1.06
SHROOM3-202ENST00000466541 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
SHROOM3-202ENST00000466541 POM121L12Q8N7R1 296 aa8.41□□□□□ -1.06
SHROOM3-202ENST00000466541 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms