RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 UBE2L3P68036 154 aaKnown RBP12.62□□□□□ -0.39
SRSF4-202ENST00000466448 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
SRSF4-202ENST00000466448 NTN5Q8WTR8 489 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-202ENST00000466448 LENEPQ9Y5L5 61 aa12.62□□□□□ -0.39
SRSF4-202ENST00000466448 ALG5Q9Y673 324 aa12.62□□□□□ -0.39
SRSF4-202ENST00000466448 IGHV3-38A0A0C4DH36 116 aa12.61□□□□□ -0.39
SRSF4-202ENST00000466448 GNRH2O43555 120 aa12.61□□□□□ -0.39
SRSF4-202ENST00000466448 NHLRC2Q8NBF2 726 aa12.61□□□□□ -0.39
SRSF4-202ENST00000466448 OR5AC2Q9NZP5 309 aa12.61□□□□□ -0.39
SRSF4-202ENST00000466448 IGHV3-16A0A0C4DH30 117 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 H0YIZ8 118 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 M0R2P5 195 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 MPC2O95563 127 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 PPT1P50897 306 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 TIRAPP58753 221 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
SRSF4-202ENST00000466448 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 LINC01556Q5JQF7 62 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 Q8N814 137 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 TMED6Q8WW62 240 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 HYLS1Q96M11 299 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 MED28Q9H204 178 aa12.59□□□□□ -0.39
SRSF4-202ENST00000466448 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
SRSF4-202ENST00000466448 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-202ENST00000466448 RGS21Q2M5E4 152 aa12.58□□□□□ -0.4
SRSF4-202ENST00000466448 Q9HAA7 133 aa12.58□□□□□ -0.4
SRSF4-202ENST00000466448 FAM30AQ9NZY2 134 aa12.58□□□□□ -0.4
SRSF4-202ENST00000466448 TYMSP04818 313 aa12.57□□□□□ -0.4
SRSF4-202ENST00000466448 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
SRSF4-202ENST00000466448 RPH3ALQ9UNE2 315 aa12.57□□□□□ -0.4
SRSF4-202ENST00000466448 F6UZH7 168 aa12.56□□□□□ -0.4
SRSF4-202ENST00000466448 EIF3GO75821 320 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRSF4-202ENST00000466448 FFAR4Q5NUL3 377 aa12.56□□□□□ -0.4
SRSF4-202ENST00000466448 ATP5SQ99766 215 aa12.56□□□□□ -0.4
SRSF4-202ENST00000466448 TRAV8-6A0A0B4J262 113 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
SRSF4-202ENST00000466448 OR10J3Q5JRS4 329 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 SLC25A29Q8N8R3 303 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 TVP23CQ96ET8 276 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 SDF2L1Q9HCN8 221 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 MBD2Q9UBB5 411 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
SRSF4-202ENST00000466448 TRAV8-1A0A0A6YYK1 113 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 PGPA6NDG6 321 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
SRSF4-202ENST00000466448 J3QL48 77 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
SRSF4-202ENST00000466448 TAS2R45P59539 299 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 GOLT1AQ6ZVE7 132 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
SRSF4-202ENST00000466448 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
SRSF4-202ENST00000466448 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
SRSF4-202ENST00000466448 IGHV3-30-3P0DP02 117 aa12.53□□□□□ -0.4
SRSF4-202ENST00000466448 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
SRSF4-202ENST00000466448 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
SRSF4-202ENST00000466448 C1QBP02746 253 aa12.52□□□□□ -0.41
SRSF4-202ENST00000466448 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
SRSF4-202ENST00000466448 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
SRSF4-202ENST00000466448 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
SRSF4-202ENST00000466448 KCNS1Q96KK3 526 aa12.52□□□□□ -0.41
SRSF4-202ENST00000466448 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 WFDC2Q14508 124 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 RHOHQ15669 191 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 LELP1Q5T871 98 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
SRSF4-202ENST00000466448 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
SRSF4-202ENST00000466448 RS1O15537 224 aa12.5□□□□□ -0.41
SRSF4-202ENST00000466448 GIPP09681 153 aaPredicted RBP12.5□□□□□ -0.41
SRSF4-202ENST00000466448 GNG5P63218 68 aa12.5□□□□□ -0.41
SRSF4-202ENST00000466448 LAGE3Q14657 143 aa12.49□□□□□ -0.41
SRSF4-202ENST00000466448 Q8N3U1 123 aa12.49□□□□□ -0.41
SRSF4-202ENST00000466448 ARL6IP6Q8N6S5 226 aa12.49□□□□□ -0.41
SRSF4-202ENST00000466448 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
SRSF4-202ENST00000466448 C11orf21Q9P2W6 132 aa12.49□□□□□ -0.41
SRSF4-202ENST00000466448 CIDEAO60543 219 aa12.48□□□□□ -0.41
SRSF4-202ENST00000466448 PLA2G1BP04054 148 aaKnown RBP12.48□□□□□ -0.41
SRSF4-202ENST00000466448 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
SRSF4-202ENST00000466448 Q6ZSA8 131 aa12.48□□□□□ -0.41
SRSF4-202ENST00000466448 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
SRSF4-202ENST00000466448 GTSF1LQ9H1H1 148 aa12.48□□□□□ -0.41
SRSF4-202ENST00000466448 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
SRSF4-202ENST00000466448 LINC00528Q8N1L1 170 aa12.47□□□□□ -0.41
SRSF4-202ENST00000466448 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
SRSF4-202ENST00000466448 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
SRSF4-202ENST00000466448 DNAH8Q96JB1 4490 aa12.47□□□□□ -0.41
SRSF4-202ENST00000466448 RAB2AP61019 212 aa12.46□□□□□ -0.41
SRSF4-202ENST00000466448 ZNF506Q5JVG8 444 aa12.46□□□□□ -0.41
SRSF4-202ENST00000466448 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
SRSF4-202ENST00000466448 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
SRSF4-202ENST00000466448 PGPEP1LA6NFU8 196 aa12.45□□□□□ -0.42
SRSF4-202ENST00000466448 KRTAP29-1A8MX34 341 aaPredicted RBP12.45□□□□□ -0.42
SRSF4-202ENST00000466448 LECT2O14960 151 aa12.45□□□□□ -0.42
SRSF4-202ENST00000466448 HMGB3O15347 200 aaKnown RBP12.45□□□□□ -0.42
SRSF4-202ENST00000466448 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms