RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 LINC01587Q99440 93 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 SPATA25Q9BR10 227 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 BIN3Q9NQY0 253 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
VCP-204ENST00000466100 IGHV3OR16-12A0A075B7B8 117 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 ZNF705GA8MUZ8 300 aaPredicted RBP8.03□□□□□ -1.12
VCP-204ENST00000466100 KRBOX1C9JBD0 128 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 F8W036 122 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 AZU1P20160 251 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 ADIRFQ15847 76 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 RNASE8Q8TDE3 154 aaKnown RBP8.03□□□□□ -1.12
VCP-204ENST00000466100 TMEM208Q9BTX3 173 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 RNASE7Q9H1E1 156 aaKnown RBP8.03□□□□□ -1.12
VCP-204ENST00000466100 TP53TG3Q9ULZ0 132 aa8.03□□□□□ -1.12
VCP-204ENST00000466100 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 TYMSP04818 313 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 RPL19P84098 196 aaKnown RBP8.02□□□□□ -1.13
VCP-204ENST00000466100 PNRC1Q12796 327 aaPredicted RBP8.02□□□□□ -1.13
VCP-204ENST00000466100 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 FAM159AQ6UWV7 190 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 C11orf72Q8NBR9 251 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 NUDT10Q8NFP7 164 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 IL17DQ8TAD2 202 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 NUDT11Q96G61 164 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 NAGKQ9UJ70 344 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 CSMD3Q7Z407 3707 aa8.02□□□□□ -1.13
VCP-204ENST00000466100 IGHV3-16A0A0C4DH30 117 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 IGHV4-28A0A0C4DH34 117 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 M0R036 132 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 P01737 135 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 CXCL1P09341 107 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 MIFP14174 115 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 RRN3P1Q2M238 152 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 IBA57Q5T440 356 aaKnown RBP8.01□□□□□ -1.13
VCP-204ENST00000466100 TMEM263Q8WUH6 116 aaKnown RBP8.01□□□□□ -1.13
VCP-204ENST00000466100 SFRP2Q96HF1 295 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 KCNS1Q96KK3 526 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 NACAE9PAV3 2078 aa8.01□□□□□ -1.13
VCP-204ENST00000466100 CBY3A6NI87 242 aa8□□□□□ -1.13
VCP-204ENST00000466100 B4DEV8 164 aa8□□□□□ -1.13
VCP-204ENST00000466100 GNRH2O43555 120 aa8□□□□□ -1.13
VCP-204ENST00000466100 ORM1P02763 201 aa8□□□□□ -1.13
VCP-204ENST00000466100 NHLRC4P0CG21 123 aaPredicted RBP8□□□□□ -1.13
VCP-204ENST00000466100 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
VCP-204ENST00000466100 ZNF493Q6ZR52 646 aa8□□□□□ -1.13
VCP-204ENST00000466100 C16orf74Q96GX8 76 aa8□□□□□ -1.13
VCP-204ENST00000466100 C11orf68Q9H3H3 251 aaKnown RBP8□□□□□ -1.13
VCP-204ENST00000466100 RPP21Q9H633 154 aaKnown RBP8□□□□□ -1.13
VCP-204ENST00000466100 ZMAT4Q9H898 229 aa8□□□□□ -1.13
VCP-204ENST00000466100 MDFICQ9P1T7 246 aa8□□□□□ -1.13
VCP-204ENST00000466100 V9GYV3 84 aa8□□□□□ -1.13
VCP-204ENST00000466100 TRGV11A0A075B6L2 103 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 TMEM189A5PLL7 270 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 HTN1P15515 57 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 TCL1AP56279 114 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 CT83Q5H943 113 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 DAZAP1Q96EP5 407 aaKnown RBP7.99□□□□□ -1.13
VCP-204ENST00000466100 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 STARD9Q9P2P6 4700 aa7.99□□□□□ -1.13
VCP-204ENST00000466100 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 GATCO43716 136 aaKnown RBP7.98□□□□□ -1.13
VCP-204ENST00000466100 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 GZMBP10144 247 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 RPS20P60866 119 aaKnown RBP7.98□□□□□ -1.13
VCP-204ENST00000466100 ZNF415Q09FC8 603 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 RNF212Q495C1 297 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 OR10G8Q8NGN5 311 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 SCRT2Q9NQ03 307 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 GSN-AS1Q9NRJ2 163 aa7.98□□□□□ -1.13
VCP-204ENST00000466100 PLECQ15149 4684 aaKnown RBP7.98□□□□□ -1.13
VCP-204ENST00000466100 H3BVH4 76 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 DEFB4AO15263 64 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 SNAI2O43623 268 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 MED14OSP0DP75 135 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 ASIPP42127 132 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 C15orf54Q8N8G6 183 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 CLRN3Q8NCR9 226 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 GTSF1Q8WW33 167 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
VCP-204ENST00000466100 IL36BQ9NZH7 164 aa7.97□□□□□ -1.13
VCP-204ENST00000466100 A0A0J9YWU9 116 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 APOC3P02656 99 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 ARMS2P0C7Q2 107 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 CTRLP40313 264 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 DAZ2Q13117 558 aaKnown RBP7.96□□□□□ -1.14
VCP-204ENST00000466100 LINC00612Q8N6U2 182 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 TSKUQ8WUA8 353 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 CELA1Q9UNI1 258 aa7.96□□□□□ -1.14
VCP-204ENST00000466100 XKRY2A2RUG3 117 aa7.95□□□□□ -1.14
VCP-204ENST00000466100 A8MWL6 223 aa7.95□□□□□ -1.14
VCP-204ENST00000466100 SNURFLB1AK76 121 aa7.95□□□□□ -1.14
VCP-204ENST00000466100 PPP1R2P9O14990 202 aa7.95□□□□□ -1.14
VCP-204ENST00000466100 SPINK4O60575 86 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms