RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF815PA8K554 130 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 PRTN3P24158 256 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 UBE2D3P61077 147 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 UBE2D2P62837 147 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 EBI3Q14213 229 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 KLK9Q2XQG4 91 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 KLK9Q9UKQ9 250 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 NCOR2Q9Y618 2525 aa15.11■□□□□ 0.01
SDF4-205ENST00000465727 LINC01549A6NIU2 74 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 SPINK8P0C7L1 97 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 LENEPQ9Y5L5 61 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 IGHV3OR16-8A0A075B7F1 116 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 SCGB1D4Q6XE38 83 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 PPDPFLQ8WWR9 84 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 BAALCQ8WXS3 180 aa15.1■□□□□ 0.01
SDF4-205ENST00000465727 DMXL2Q8TDJ6 3036 aa15.09■□□□□ 0.01
SDF4-205ENST00000465727 TRAV26-1A0A087WT03 109 aa15.09■□□□□ 0.01
SDF4-205ENST00000465727 TSPAN13O95857 204 aa15.09■□□□□ 0.01
SDF4-205ENST00000465727 COX6B1P14854 86 aa15.09■□□□□ 0.01
SDF4-205ENST00000465727 NFE4Q86UQ8 179 aa15.09■□□□□ 0.01
SDF4-205ENST00000465727 FAM110DQ8TAY7 271 aaPredicted RBP15.09■□□□□ 0.01
SDF4-205ENST00000465727 TRBV20-1A0A075B6N2 111 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 IGHV7-81A0A0B4J1V7 117 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 TRAV8-2A0A0B4J237 113 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 H3BVH4 76 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 M0R381 172 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 SRSF9Q13242 221 aaKnown RBP eCLIP15.08■□□□□ 0.01
SDF4-205ENST00000465727 C15orf32Q32M92 178 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 MSRB2Q9Y3D2 182 aa15.08■□□□□ 0.01
SDF4-205ENST00000465727 IGHV3-35A0A0C4DH35 117 aa15.08■□□□□ 0
SDF4-205ENST00000465727 C2orf66Q6UXQ4 117 aa15.08■□□□□ 0
SDF4-205ENST00000465727 Q6ZUT4 128 aa15.08■□□□□ 0
SDF4-205ENST00000465727 TEN1Q86WV5 123 aa15.08■□□□□ 0
SDF4-205ENST00000465727 DPH3P1Q9H4G8 78 aa15.08■□□□□ 0
SDF4-205ENST00000465727 CLPSL1A2RUU4 121 aa15.07■□□□□ 0
SDF4-205ENST00000465727 PPP1R17O96001 155 aa15.07■□□□□ 0
SDF4-205ENST00000465727 CD7P09564 240 aa15.07■□□□□ 0
SDF4-205ENST00000465727 PSMB2P49721 201 aa15.07■□□□□ 0
SDF4-205ENST00000465727 PAPPA-AS1Q5QFB9 102 aa15.07■□□□□ 0
SDF4-205ENST00000465727 RASL10AQ92737 203 aa15.07■□□□□ 0
SDF4-205ENST00000465727 KLK15Q9H2R5 256 aa15.07■□□□□ 0
SDF4-205ENST00000465727 LOC107984156A0A0G2JMH3 177 aa15.07■□□□□ 0
SDF4-205ENST00000465727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.07■□□□□ 0
SDF4-205ENST00000465727 CLEC3BP05452 202 aa15.07■□□□□ 0
SDF4-205ENST00000465727 ARL17AQ8IVW1 177 aa15.07■□□□□ 0
SDF4-205ENST00000465727 TPRP12270 2363 aaKnown RBP15.07■□□□□ 0
SDF4-205ENST00000465727 PRSS29PA6NIE9 313 aa15.06■□□□□ 0
SDF4-205ENST00000465727 VKORC1Q9BQB6 163 aa15.06■□□□□ 0
SDF4-205ENST00000465727 SH3BGRL2Q9UJC5 107 aa15.06■□□□□ 0
SDF4-205ENST00000465727 MINOS1Q5TGZ0 78 aa15.05■□□□□ 0
SDF4-205ENST00000465727 SBSPONQ8IVN8 264 aa15.05■□□□□ 0
SDF4-205ENST00000465727 MINOS1-NBL1R4GNA1 71 aa15.05■□□□□ 0
SDF4-205ENST00000465727 HERVK_113P61574 105 aa15.05■□□□□ -0
SDF4-205ENST00000465727 VMO1Q7Z5L0 202 aa15.05■□□□□ -0
SDF4-205ENST00000465727 METTL26Q96S19 204 aa15.05■□□□□ -0
SDF4-205ENST00000465727 Q5PR19 223 aa15.04■□□□□ -0
SDF4-205ENST00000465727 C1orf122Q6ZSJ8 110 aa15.04■□□□□ -0
SDF4-205ENST00000465727 NDUFA11Q86Y39 141 aa15.04■□□□□ -0
SDF4-205ENST00000465727 TIMD4Q96H15 378 aa15.04■□□□□ -0
SDF4-205ENST00000465727 MED14OSP0DP75 135 aa15.04■□□□□ -0
SDF4-205ENST00000465727 PLEKHB2Q96CS7 222 aa15.04■□□□□ -0
SDF4-205ENST00000465727 IGHV1-69DA0A0B4J2H0 117 aa15.03■□□□□ -0
SDF4-205ENST00000465727 MT-ATP8P03928 68 aa15.03■□□□□ -0
SDF4-205ENST00000465727 XGP55808 180 aa15.03■□□□□ -0
SDF4-205ENST00000465727 ZFP2Q6ZN57 461 aa15.03■□□□□ -0
SDF4-205ENST00000465727 Q8N9W7 124 aa15.03■□□□□ -0
SDF4-205ENST00000465727 PCNX1Q96RV3 2341 aa15.03■□□□□ -0
SDF4-205ENST00000465727 IGHV3-66A0A0C4DH42 116 aa15.02■□□□□ -0
SDF4-205ENST00000465727 FHL3Q13643 280 aa15.02■□□□□ -0
SDF4-205ENST00000465727 A8MWV9 139 aa15.02□□□□□ -0.01
SDF4-205ENST00000465727 U3KQE9 123 aa15.02□□□□□ -0.01
SDF4-205ENST00000465727 A0A0J9YY99 117 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 TMEM262E9PQX1 116 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 C9orf139Q6ZV77 190 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 CARD19Q96LW7 228 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 CCDC140Q96MF4 163 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 TRAV21A0A0B4J279 112 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 RNF223E7ERA6 249 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 ASIPP42127 132 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 GLMPQ8WWB7 406 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 EEF1AKMT3Q96AZ1 226 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 RPL39LQ96EH5 51 aaKnown RBP15.01□□□□□ -0.01
SDF4-205ENST00000465727 LINC00477Q96M19 166 aa15.01□□□□□ -0.01
SDF4-205ENST00000465727 POLEQ07864 2286 aa15□□□□□ -0.01
SDF4-205ENST00000465727 ADGRG4Q8IZF6 3080 aa15□□□□□ -0.01
SDF4-205ENST00000465727 TRBV7-1A0A0A6YYK4 115 aa15□□□□□ -0.01
SDF4-205ENST00000465727 ZNF688P0C7X2 276 aa15□□□□□ -0.01
SDF4-205ENST00000465727 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
SDF4-205ENST00000465727 Q6ZQT7 251 aa15□□□□□ -0.01
SDF4-205ENST00000465727 ERG28Q9UKR5 140 aa15□□□□□ -0.01
SDF4-205ENST00000465727 S100A4P26447 101 aaKnown RBP14.99□□□□□ -0.01
SDF4-205ENST00000465727 PRR9Q5T870 116 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 CLEC19AQ6UXS0 136 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 C16orf92Q96LL3 132 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 PHLDA3Q9Y5J5 127 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 TACC2O95359 2948 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 M0QXV9 152 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 TCL1BO95988 128 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 ECSCRQ19T08 205 aa14.99□□□□□ -0.01
SDF4-205ENST00000465727 C10orf126Q8N4M7 172 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms