RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 POM121L12Q8N7R1 296 aa9.17□□□□□ -0.94
COL28A1-206ENST00000465339 TVP23CQ96ET8 276 aa9.17□□□□□ -0.94
COL28A1-206ENST00000465339 AP5S1Q9NUS5 200 aa9.17□□□□□ -0.94
COL28A1-206ENST00000465339 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
COL28A1-206ENST00000465339 TRGV2A0A075B6R0 118 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 SPINK4O60575 86 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 IFNA7P01567 189 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 PPT1P50897 306 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 UBE2G2P60604 165 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 RNF212Q495C1 297 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 TMEM75Q8N9X5 138 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 MBD3L1Q8WWY6 194 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
COL28A1-206ENST00000465339 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 F6UZH7 168 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 IGLV2-11P01706 119 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 C1QBP02746 253 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 FHITP49789 147 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 OR5I1Q13606 314 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 LGALSLQ3ZCW2 172 aaPredicted RBP9.15□□□□□ -0.94
COL28A1-206ENST00000465339 EIF5AL1Q6IS14 154 aaKnown RBP9.15□□□□□ -0.94
COL28A1-206ENST00000465339 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 SPXQ9BT56 116 aa9.15□□□□□ -0.94
COL28A1-206ENST00000465339 H3BNG1 76 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 ZFP69Q49AA0 526 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 TMEM183AQ8IXX5 376 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 TCEAL7Q9BRU2 100 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 MDFICQ9P1T7 246 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 ARL2-SNX15V9GYD0 113 aa9.14□□□□□ -0.95
COL28A1-206ENST00000465339 MUC4Q99102 2169 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 PEX7O00628 323 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 HOXA5P20719 270 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 AKAP14Q86UN6 197 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 NAGKQ9UJ70 344 aa9.13□□□□□ -0.95
COL28A1-206ENST00000465339 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 GNRH2O43555 120 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 NUDT3O95989 172 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 GCGP01275 180 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 PFN1P07737 140 aaKnown RBP9.12□□□□□ -0.95
COL28A1-206ENST00000465339 RAB5CP51148 216 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 FAM3BP58499 235 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-206ENST00000465339 CST9LP1Q5W188 147 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 LINC00479Q96M42 142 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 SDF2L1Q9HCN8 221 aa9.12□□□□□ -0.95
COL28A1-206ENST00000465339 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
COL28A1-206ENST00000465339 TRAV34A0A0B4J273 112 aa9.11□□□□□ -0.95
COL28A1-206ENST00000465339 PAGE4O60829 102 aa9.11□□□□□ -0.95
COL28A1-206ENST00000465339 ZNF80P51504 273 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-206ENST00000465339 RASL10AQ92737 203 aa9.11□□□□□ -0.95
COL28A1-206ENST00000465339 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
COL28A1-206ENST00000465339 ZFP30Q9Y2G7 519 aa9.11□□□□□ -0.95
COL28A1-206ENST00000465339 HYDINQ4G0P3 5121 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 IGHV3-16A0A0C4DH30 117 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 M0R2P5 195 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 TYMSP04818 313 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 CCL18P55774 89 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 UBE2G1P62253 170 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 SLAQ13239 276 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 SLC51BQ86UW2 128 aa9.1□□□□□ -0.95
COL28A1-206ENST00000465339 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 A0A0J9YY99 117 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 TRBV6-1A0A0K0K1D8 114 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 TEX46H3BTG2 121 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 S100A9P06702 114 aaKnown RBP9.09□□□□□ -0.95
COL28A1-206ENST00000465339 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 Q86TA4 180 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.95
COL28A1-206ENST00000465339 A0A1B0GV50 99 aa9.08□□□□□ -0.96
COL28A1-206ENST00000465339 SULT1A2P50226 295 aa9.08□□□□□ -0.96
COL28A1-206ENST00000465339 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
COL28A1-206ENST00000465339 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
COL28A1-206ENST00000465339 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
COL28A1-206ENST00000465339 KMT2AQ03164 3969 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 PAX4O43316 350 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 IGHV3-53P01767 116 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 AKR1C3P42330 323 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 FHL2Q14192 279 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
COL28A1-206ENST00000465339 TRAV4A0A0B4J268 109 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 TRGV4A0A0C4DH28 118 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 LTAP01374 205 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 CRYBA4P53673 196 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 C9orf62Q8N4C0 152 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 OR4C5Q8NGB2 326 aa9.06□□□□□ -0.96
COL28A1-206ENST00000465339 PTH2Q96A98 100 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms