RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SNRPD3P62318 126 aaKnown RBP12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 S100A12P80511 92 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 SLAQ13239 276 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 ODF3L2Q3SX64 289 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 PGLYRP4Q96LB8 373 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 TP53TG3Q9ULZ0 132 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 SH2D1AO60880 128 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 NIT2Q9NQR4 276 aa12.56□□□□□ -0.4
EXOSC3-203ENST00000465229 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 DEFB131AP59861 70 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 C19orf73Q9NVV2 129 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 DNAH3Q8TD57 4116 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 TMEM189A5PLL7 270 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 SRIP30626 198 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 CAMPP49913 170 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 RIGQ13278 110 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 ASCL2Q99929 193 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
EXOSC3-203ENST00000465229 FABP5P3A8MUU1 101 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 SERF1AO75920 110 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 GZMBP10144 247 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 ZNF138P52744 262 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 LINC00310P59036 64 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 DEFB1P60022 68 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 JOSD1Q15040 202 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 KIAA1644Q3SXP7 199 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 TMEM78Q5T7P6 136 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 Q8TAT8 98 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 AGPAT4-IT1Q9H0P7 198 aa12.54□□□□□ -0.4
EXOSC3-203ENST00000465229 OR11H12B2RN74 326 aa12.53□□□□□ -0.4
EXOSC3-203ENST00000465229 ZNF124Q15973 351 aa12.53□□□□□ -0.4
EXOSC3-203ENST00000465229 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
EXOSC3-203ENST00000465229 Q8N1Y9 231 aa12.53□□□□□ -0.4
EXOSC3-203ENST00000465229 ZNF738Q8NE65 137 aa12.53□□□□□ -0.4
EXOSC3-203ENST00000465229 NUPR1O60356 82 aa12.52□□□□□ -0.4
EXOSC3-203ENST00000465229 ERCC8Q13216 396 aa12.52□□□□□ -0.4
EXOSC3-203ENST00000465229 BORCS7Q96B45 105 aa12.52□□□□□ -0.4
EXOSC3-203ENST00000465229 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.4
EXOSC3-203ENST00000465229 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.4
EXOSC3-203ENST00000465229 F6UB75 175 aa12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 C18orf32Q8TCD1 76 aa12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 LINC00477Q96M19 166 aa12.51□□□□□ -0.41
EXOSC3-203ENST00000465229 ARMS2P0C7Q2 107 aa12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 CTRLP40313 264 aa12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 SSBP4Q9BWG4 385 aaPredicted RBP12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 AGRNO00468 2067 aa12.5□□□□□ -0.41
EXOSC3-203ENST00000465229 KNCNA6PVL3 124 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 F2Z2F3 143 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 IGLC6P0CF74 106 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 FOXI2Q6ZQN5 318 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 OR8A1Q8NGG7 326 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
EXOSC3-203ENST00000465229 LOC102724200A0A096LPH7 203 aaPredicted RBP12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 A0A0J9YX75 114 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 PCP4L1A6NKN8 68 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 EBLN2Q6P2I7 272 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 ZNF575Q86XF7 245 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 OR10J6PQ8NGY7 276 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
EXOSC3-203ENST00000465229 H3BMM0 161 aa12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 PRB2P02812 416 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 GPX1P07203 203 aa12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
EXOSC3-203ENST00000465229 ORM1P02763 201 aa12.46□□□□□ -0.41
EXOSC3-203ENST00000465229 RCHY1Q96PM5 261 aa12.46□□□□□ -0.41
EXOSC3-203ENST00000465229 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.41
EXOSC3-203ENST00000465229 TMSB15BA0A087X1C1 80 aa12.45□□□□□ -0.42
EXOSC3-203ENST00000465229 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
EXOSC3-203ENST00000465229 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 STHQ8IWL8 128 aa12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 DUSP14O95147 198 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms