RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 PAEPP09466 180 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 PSPHP78330 225 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 ALX1Q15699 326 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 CCDC153Q494R4 210 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 HSD17B12Q53GQ0 312 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 SPINK9Q5DT21 86 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 TMEM244Q5VVB8 128 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 TCTE3Q8IZS6 198 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 AP1S3Q96PC3 154 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 C10orf95Q9H7T3 257 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 DNAJC15Q9Y5T4 150 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 ATG2AQ2TAZ0 1938 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 MEGF8Q7Z7M0 2845 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 ESPL1Q14674 2120 aa0.4□□□□□ -2.35
TM9SF3-203ENST00000464654 LOC107984156A0A0G2JMH3 177 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 LOC105371267A0A1B0GV96 52 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 TMEM30CPA0ZSE6 113 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 BBIP1A8MTZ0 92 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 CDC42EP2O14613 210 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 OR2H2O95918 312 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 DBIP07108 87 aaKnown RBP0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 HIST1H1BP16401 226 aaKnown RBP0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 CKS2P33552 79 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 RHOHQ15669 191 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 LYPD5Q6UWN5 251 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 ARL17AQ8IVW1 177 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 OR8J3Q8NGG0 315 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 MAGOHBQ96A72 148 aaKnown RBP0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 DMAC1Q96GE9 116 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 SMIM7Q9BQ49 75 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 AIF1LQ9BQI0 150 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 MRPL36Q9P0J6 103 aaKnown RBP0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 COMMD3Q9UBI1 195 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 UHRF1BP1LA0JNW5 1464 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 KDM5CP41229 1560 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 ABCA1O95477 2261 aa0.39□□□□□ -2.35
TM9SF3-203ENST00000464654 LRP5O75197 1615 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 IGHV1-24A0A0C4DH33 117 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 ARPC5O15511 151 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 HLA-DRB4P13762 266 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 ADCYAP1P18509 176 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 EVI2AP22794 236 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 AKR1D1P51857 326 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 PCBD1P61457 104 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 SNRPD3P62318 126 aaKnown RBP0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 PLGLB1Q02325 96 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 FXYD3Q14802 87 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 Q6ZS92 163 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 PLAC4Q8WY50 150 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 HLA-DRB4X5D2U9 266 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 CEP152O94986 1710 aa0.38□□□□□ -2.35
TM9SF3-203ENST00000464654 PLXNA2O75051 1894 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 ARHGEF10O15013 1369 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 TRAV2A0A0B4J234 112 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 CXorf51AA0A1B0GTR3 108 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 TPST1O60507 370 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 CAV3P56539 151 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 IDO2Q6ZQW0 420 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 C5orf56Q8N8D9 126 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 LINC00208Q96KT6 92 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 SLC35B3Q9H1N7 401 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 BANF2Q9H503 90 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 MED13LQ71F56 2210 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
TM9SF3-203ENST00000464654 CACNA1EQ15878 2313 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 CPDO75976 1380 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 A0A0G2JMM0 328 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 LOC101927531A0A1B0GV80 90 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 HIGD1CA8MV81 97 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 SMIM24O75264 130 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 IGKCP01834 107 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 TSPAN19P0C672 248 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 KDELR1P24390 212 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 CMPK1P30085 196 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 GLYATL3Q5SZD4 288 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 PPDPFLQ8WWR9 84 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 CALML5Q9NZT1 146 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 OVOS2A0A0J9YW53 1432 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 BLMP54132 1417 aaPredicted RBP0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 OVOS2Q6IE36 1432 aa0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 AFDNP55196 1824 aaKnown RBP0.36□□□□□ -2.35
TM9SF3-203ENST00000464654 ZCCHC6Q5VYS8 1495 aaKnown RBP0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 CDK5RAP2Q96SN8 1893 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 CASZ1Q86V15 1759 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 A0A096LNT2 108 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 TRBV10-1A0A0K0K1A3 114 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 M0R2P5 195 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 RPL37P61927 97 aaKnown RBP0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 ATP11AUNQ6ZP68 121 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 Q86TA4 180 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 ATP6V0E2Q8NHE4 81 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 ATG5Q9H1Y0 275 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 BATF3Q9NR55 127 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 TAS2R8Q9NYW2 309 aa0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 LRP1Q07954 4544 aaKnown RBP0.35□□□□□ -2.35
TM9SF3-203ENST00000464654 RREB1Q92766 1687 aa0.34□□□□□ -2.35
TM9SF3-203ENST00000464654 MAP2P11137 1827 aaKnown RBP0.34□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms