RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 OR4C5Q8NGB2 326 aa13.17□□□□□ -0.3
MCF2L2-206ENST00000464626 MSRB1Q9NZV6 116 aa13.17□□□□□ -0.3
MCF2L2-206ENST00000464626 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
MCF2L2-206ENST00000464626 GNRH2O43555 120 aa13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 TIRAPP58753 221 aa13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 SH2D6Q7Z4S9 175 aa13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 TVP23CQ96ET8 276 aa13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
MCF2L2-206ENST00000464626 TYMSP04818 313 aa13.15□□□□□ -0.3
MCF2L2-206ENST00000464626 RAB2AP61019 212 aa13.15□□□□□ -0.3
MCF2L2-206ENST00000464626 SDF2L1Q9HCN8 221 aa13.15□□□□□ -0.3
MCF2L2-206ENST00000464626 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
MCF2L2-206ENST00000464626 RPH3ALQ9UNE2 315 aa13.15□□□□□ -0.3
MCF2L2-206ENST00000464626 TRAV8-1A0A0A6YYK1 113 aa13.14□□□□□ -0.31
MCF2L2-206ENST00000464626 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
MCF2L2-206ENST00000464626 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
MCF2L2-206ENST00000464626 F6UZH7 168 aa13.13□□□□□ -0.31
MCF2L2-206ENST00000464626 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
MCF2L2-206ENST00000464626 OR10G9Q8NGN4 311 aa13.13□□□□□ -0.31
MCF2L2-206ENST00000464626 OR10G7Q8NGN6 311 aa13.13□□□□□ -0.31
MCF2L2-206ENST00000464626 EPM2AB3EWF7 344 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 CIDEAO60543 219 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 XGP55808 180 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
MCF2L2-206ENST00000464626 CRYGDP07320 174 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 STAG3L2P0CL84 134 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 STAG3L3P0CL85 134 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 ARL14EPLP0DKL9 152 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 GNG5P63218 68 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 NDFIP1Q9BT67 221 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
MCF2L2-206ENST00000464626 LOC100131303A0A0U1RQF7 123 aa13.1□□□□□ -0.31
MCF2L2-206ENST00000464626 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
MCF2L2-206ENST00000464626 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
MCF2L2-206ENST00000464626 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
MCF2L2-206ENST00000464626 FAT1Q14517 4588 aa13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 TCRAP04437 139 aa13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 KRTAP10-1P60331 282 aa13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
MCF2L2-206ENST00000464626 IGHV3-38A0A0C4DH36 116 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 TAAR5O14804 337 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 RS1O15537 224 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 ZNF876PQ49A33 203 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 PTH2Q96A98 100 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 C11orf21Q9P2W6 132 aa13.08□□□□□ -0.32
MCF2L2-206ENST00000464626 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 K7EQM0 130 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 GCHFRP30047 84 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 PPT1P50897 306 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 SERF2P84101 59 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 CFAP126Q5VTH2 177 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 RAB24Q969Q5 203 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 C9orf85Q96MD7 179 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
MCF2L2-206ENST00000464626 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 MBP02144 154 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 RHOHQ15669 191 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 ALG5Q9Y673 324 aa13.06□□□□□ -0.32
MCF2L2-206ENST00000464626 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 GCGP01275 180 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 GCSHP23434 173 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 DPPA3Q6W0C5 159 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 TMEM167BQ9NRX6 74 aa13.05□□□□□ -0.32
MCF2L2-206ENST00000464626 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 LRCOL1A6NCL2 159 aa13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 FLI1Q01543 452 aaPredicted RBP13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 EPDR1Q9UM22 224 aa13.04□□□□□ -0.32
MCF2L2-206ENST00000464626 GGTLC3B5MD39 225 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 CXorf1O96002 111 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 ZFP69Q49AA0 526 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 LELP1Q5T871 98 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 NTN5Q8WTR8 489 aaPredicted RBP13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
MCF2L2-206ENST00000464626 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.32
MCF2L2-206ENST00000464626 PSCAO43653 123 aa13.02□□□□□ -0.33
MCF2L2-206ENST00000464626 MGST1P10620 155 aaKnown RBP13.02□□□□□ -0.33
MCF2L2-206ENST00000464626 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.33
MCF2L2-206ENST00000464626 ZNF506Q5JVG8 444 aa13.02□□□□□ -0.33
MCF2L2-206ENST00000464626 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms