RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 IGHV4OR15-8A0A075B7B6 117 aa16.44■□□□□ 0.22
PDLIM2-216ENST00000464275 A0A087WW49 117 aa16.44■□□□□ 0.22
PDLIM2-216ENST00000464275 TMEM213A2RRL7 107 aa16.44■□□□□ 0.22
PDLIM2-216ENST00000464275 KRTAP1-1Q07627 177 aa16.44■□□□□ 0.22
PDLIM2-216ENST00000464275 ORMDL3Q8N138 153 aa16.43■□□□□ 0.22
PDLIM2-216ENST00000464275 ORAOV1Q8WV07 137 aa16.43■□□□□ 0.22
PDLIM2-216ENST00000464275 IGKV3-7A0A075B6H7 116 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 ID1P41134 155 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 PRR31Q5SQ13 230 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 LINC00173Q6ZV60 143 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 ZNF575Q86XF7 245 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 YAE1D1Q9NRH1 226 aa16.42■□□□□ 0.22
PDLIM2-216ENST00000464275 DNAJC9-AS1A6NH13 148 aa16.41■□□□□ 0.22
PDLIM2-216ENST00000464275 SLC25A34Q6PIV7 304 aa16.41■□□□□ 0.22
PDLIM2-216ENST00000464275 ZNF747Q9BV97 191 aa16.41■□□□□ 0.22
PDLIM2-216ENST00000464275 PDZD2O15018 2839 aa16.41■□□□□ 0.22
PDLIM2-216ENST00000464275 CSN3P07498 182 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 DPF1Q92782 380 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 MXRA5Q9NR99 2828 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 HOXD3P31249 432 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 SYNJ2BPP57105 145 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 OR8A1Q8NGG7 326 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 PRELID3AQ96N28 172 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 PMCHL2Q9BQD1 86 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 CNFNQ9BYD5 112 aa16.4■□□□□ 0.22
PDLIM2-216ENST00000464275 SRD5A1P18405 259 aa16.39■□□□□ 0.21
PDLIM2-216ENST00000464275 TFPI2P48307 235 aa16.39■□□□□ 0.21
PDLIM2-216ENST00000464275 DCANP1Q8TF63 244 aa16.39■□□□□ 0.21
PDLIM2-216ENST00000464275 Q6ZSV7 163 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 IGKV3D-20A0A0C4DH25 116 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 D6R8Y8 96 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 PPBPP02775 128 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 HINT1P49773 126 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 SCRT2Q9NQ03 307 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 C11orf21Q9P2W6 132 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 SELENOKQ9Y6D0 94 aa16.38■□□□□ 0.21
PDLIM2-216ENST00000464275 GCN1Q92616 2671 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 TRBV7-9A0A0J9YWB2 115 aa16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 FAM19A4Q96LR4 140 aa16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 ZNF469Q96JG9 3925 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 NPSP0C0P6 89 aa16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 ZFAND2AQ8N6M9 145 aa16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 SIGLEC8Q9NYZ4 499 aa16.37■□□□□ 0.21
PDLIM2-216ENST00000464275 DEFB1P60022 68 aa16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 TWIST1Q15672 202 aa16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 MRPL51Q4U2R6 128 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 PRR9Q5T870 116 aa16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 C12orf54Q6X4T0 127 aa16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 WFDC3Q8IUB2 231 aa16.36■□□□□ 0.21
PDLIM2-216ENST00000464275 AMN1Q8IY45 258 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 C4orf3Q8WVX3 66 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 FLNAP21333 2647 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 MUC21A0A0G2JKD1 596 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 MUC21A0A140T8X8 626 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 hDV102S1A0JD36 115 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 F6UB75 175 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 IFI27P40305 119 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 MUC21Q5SSG8 566 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 C18orf65Q6ZTR6 163 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 COX11Q9Y6N1 276 aa16.35■□□□□ 0.21
PDLIM2-216ENST00000464275 LINC01619G3V211 115 aa16.34■□□□□ 0.21
PDLIM2-216ENST00000464275 LGALS9BQ3B8N2 356 aa16.34■□□□□ 0.21
PDLIM2-216ENST00000464275 LGALS9CQ6DKI2 356 aa16.34■□□□□ 0.21
PDLIM2-216ENST00000464275 ESM1Q9NQ30 184 aa16.34■□□□□ 0.21
PDLIM2-216ENST00000464275 TRAV21A0A0B4J279 112 aa16.33■□□□□ 0.21
PDLIM2-216ENST00000464275 HBDP02042 147 aa16.33■□□□□ 0.21
PDLIM2-216ENST00000464275 SCGB2A2Q13296 93 aa16.33■□□□□ 0.21
PDLIM2-216ENST00000464275 APRG1Q8IVJ8 170 aa16.33■□□□□ 0.21
PDLIM2-216ENST00000464275 K7EQG2 157 aa16.33■□□□□ 0.2
PDLIM2-216ENST00000464275 CKS2P33552 79 aa16.33■□□□□ 0.2
PDLIM2-216ENST00000464275 TCTEX1D4Q5JR98 221 aa16.33■□□□□ 0.2
PDLIM2-216ENST00000464275 CCDC168Q8NDH2 2452 aa16.33■□□□□ 0.2
PDLIM2-216ENST00000464275 SLURP1P55000 103 aa16.32■□□□□ 0.2
PDLIM2-216ENST00000464275 PSMG4Q5JS54 123 aa16.32■□□□□ 0.2
PDLIM2-216ENST00000464275 OR1N2Q8NGR9 330 aa16.32■□□□□ 0.2
PDLIM2-216ENST00000464275 TLN2Q9Y4G6 2542 aa16.32■□□□□ 0.2
PDLIM2-216ENST00000464275 A0A096LNJ9 63 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 LINC01546A6NGU7 62 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 DEFB136Q30KP8 78 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 FASNP49327 2511 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 J3KRW8 73 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 COX8AP10176 69 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 SNRPD3P62318 126 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 Q6ZQT7 251 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 OR11H1Q8NG94 326 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 WFDC12Q8WWY7 111 aa16.31■□□□□ 0.2
PDLIM2-216ENST00000464275 KHDC1LQ5JSQ8 128 aa16.3■□□□□ 0.2
PDLIM2-216ENST00000464275 TCF21O43680 179 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 MAP1LC3AQ9H492 121 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 TMEM160Q9NX00 188 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 SNAI2O43623 268 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 MSRB1Q9NZV6 116 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 PEMTQ9UBM1 199 aa16.29■□□□□ 0.2
PDLIM2-216ENST00000464275 ZNF688P0C7X2 276 aa16.28■□□□□ 0.2
PDLIM2-216ENST00000464275 RNASE4P34096 147 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-216ENST00000464275 KLHL30-AS1Q8NEE0 82 aa16.28■□□□□ 0.2
PDLIM2-216ENST00000464275 NXT2Q9NPJ8 142 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-216ENST00000464275 LOC389332A0A1B0GUA5 103 aa16.27■□□□□ 0.2
PDLIM2-216ENST00000464275 RNASE1P07998 156 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-216ENST00000464275 CACNG7P62955 275 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms