RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 ABCA13Q86UQ4 5058 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 BORCS7-ASMTA0A0B4J1R7 106 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 SMLR1H3BR10 107 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 CDK2AP2O75956 126 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 TCTE3Q8IZS6 198 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 TVP23CQ96ET8 276 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 DNAH5Q8TE73 4624 aa12.9□□□□□ -0.34
SF3A1-205ENST00000463818 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 MBP02144 154 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 KRTAP10-2P60368 255 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 GNG5P63218 68 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 TREM1Q9NP99 234 aa12.89□□□□□ -0.35
SF3A1-205ENST00000463818 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 F6UZH7 168 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 K7EQD1 137 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 HSPG2P98160 4391 aa12.88□□□□□ -0.35
SF3A1-205ENST00000463818 M0R2P5 195 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 GYPEP15421 78 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
SF3A1-205ENST00000463818 Q6ZRN7 208 aaPredicted RBP12.87□□□□□ -0.35
SF3A1-205ENST00000463818 SGK494Q96LW2 274 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
SF3A1-205ENST00000463818 TRAV4A0A0B4J268 109 aa12.86□□□□□ -0.35
SF3A1-205ENST00000463818 A0A0D9SG52 128 aa12.86□□□□□ -0.35
SF3A1-205ENST00000463818 SRIP30626 198 aa12.86□□□□□ -0.35
SF3A1-205ENST00000463818 OR4C5Q8NGB2 326 aa12.86□□□□□ -0.35
SF3A1-205ENST00000463818 RAB24Q969Q5 203 aa12.86□□□□□ -0.35
SF3A1-205ENST00000463818 ORM1P02763 201 aa12.85□□□□□ -0.35
SF3A1-205ENST00000463818 TYMSP04818 313 aa12.85□□□□□ -0.35
SF3A1-205ENST00000463818 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
SF3A1-205ENST00000463818 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
SF3A1-205ENST00000463818 GCHFRP30047 84 aa12.84□□□□□ -0.35
SF3A1-205ENST00000463818 MAPKAPK5-AS1Q8N8E1 139 aa12.84□□□□□ -0.35
SF3A1-205ENST00000463818 KCNS1Q96KK3 526 aa12.84□□□□□ -0.35
SF3A1-205ENST00000463818 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 SERTM2A0A1B0GWG4 89 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 BCL2L11O43521 198 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 TCRAP04437 139 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
SF3A1-205ENST00000463818 C9JCJ5 164 aa12.82□□□□□ -0.36
SF3A1-205ENST00000463818 ZNF80P51504 273 aaPredicted RBP12.82□□□□□ -0.36
SF3A1-205ENST00000463818 SUMO1P63165 101 aaKnown RBP12.82□□□□□ -0.36
SF3A1-205ENST00000463818 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
SF3A1-205ENST00000463818 ACTR3CQ9C0K3 210 aaPredicted RBP12.82□□□□□ -0.36
SF3A1-205ENST00000463818 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
SF3A1-205ENST00000463818 LOC100131303A0A0U1RQF7 123 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 K7EQM0 130 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 C1QBP02746 253 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 ZNF726P1Q15940 193 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 WFDC10BQ8IUB3 73 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
SF3A1-205ENST00000463818 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
SF3A1-205ENST00000463818 CTXND1A0A1B0GTU2 59 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 CXorf1O96002 111 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
SF3A1-205ENST00000463818 STOML3Q8TAV4 291 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 TMEM167BQ9NRX6 74 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
SF3A1-205ENST00000463818 KANTRA0A1W2PQU2 76 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 EREGO14944 169 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 GCGP01275 180 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 EVI2AP22794 236 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 PRNTQ86SH4 94 aa12.79□□□□□ -0.36
SF3A1-205ENST00000463818 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 K7EP13 123 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 ERVFC1-1P60608 527 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
SF3A1-205ENST00000463818 AKR1C8PQ5T2L2 129 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 TMUB2Q71RG4 321 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 SH2D6Q7Z4S9 175 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 Q8N1X5 172 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 MSRB1Q9NZV6 116 aa12.78□□□□□ -0.36
SF3A1-205ENST00000463818 FBLL1A6NHQ2 334 aaKnown RBP12.77□□□□□ -0.37
SF3A1-205ENST00000463818 UMAD1C9J7I0 102 aa12.77□□□□□ -0.37
SF3A1-205ENST00000463818 RS1O15537 224 aa12.77□□□□□ -0.37
SF3A1-205ENST00000463818 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
SF3A1-205ENST00000463818 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
SF3A1-205ENST00000463818 EIF5AP63241 154 aaKnown RBP12.77□□□□□ -0.37
SF3A1-205ENST00000463818 LGALSLQ3ZCW2 172 aaPredicted RBP12.77□□□□□ -0.37
SF3A1-205ENST00000463818 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
SF3A1-205ENST00000463818 DPPA3Q6W0C5 159 aa12.77□□□□□ -0.37
SF3A1-205ENST00000463818 CYB561D1Q8N8Q1 229 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms