RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 SAPCD1Q5SSQ6 148 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 Q86TA4 180 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 HOXA5P20719 270 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 CRIP1P50238 77 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 TMEM183BQ1AE95 376 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 TMEM183AQ8IXX5 376 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
VPS52-214ENST00000463486 EPPK1P58107 5090 aaKnown RBP12.4□□□□□ -0.42
VPS52-214ENST00000463486 IGHV3-16A0A0C4DH30 117 aa12.4□□□□□ -0.42
VPS52-214ENST00000463486 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
VPS52-214ENST00000463486 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
VPS52-214ENST00000463486 MUC4Q99102 2169 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 TRGV1A0A0A0MS02 117 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 F5H768 121 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 TYMSP04818 313 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 PPT1P50897 306 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 ZNF575Q86XF7 245 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 FMC1Q96HJ9 113 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 NAGKQ9UJ70 344 aa12.39□□□□□ -0.43
VPS52-214ENST00000463486 TRGV11A0A075B6L2 103 aa12.38□□□□□ -0.43
VPS52-214ENST00000463486 LTAP01374 205 aa12.38□□□□□ -0.43
VPS52-214ENST00000463486 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
VPS52-214ENST00000463486 MRPL16Q9NX20 251 aaKnown RBP12.38□□□□□ -0.43
VPS52-214ENST00000463486 ZFP30Q9Y2G7 519 aa12.38□□□□□ -0.43
VPS52-214ENST00000463486 DNAH17Q9UFH2 4485 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 IGKV3D-20A0A0C4DH25 116 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 RASL10AQ92737 203 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 SPXQ9BT56 116 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
VPS52-214ENST00000463486 FRAS1Q86XX4 4008 aa12.36□□□□□ -0.43
VPS52-214ENST00000463486 ALKAL2Q6UX46 152 aa12.36□□□□□ -0.43
VPS52-214ENST00000463486 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
VPS52-214ENST00000463486 MANBALQ9NQG1 85 aa12.36□□□□□ -0.43
VPS52-214ENST00000463486 TRGV2A0A075B6R0 118 aa12.35□□□□□ -0.43
VPS52-214ENST00000463486 FABP5P3A8MUU1 101 aa12.35□□□□□ -0.43
VPS52-214ENST00000463486 POM121L12Q8N7R1 296 aa12.35□□□□□ -0.43
VPS52-214ENST00000463486 C11orf52Q96A22 123 aa12.35□□□□□ -0.43
VPS52-214ENST00000463486 MLST8Q9BVC4 326 aa12.35□□□□□ -0.43
VPS52-214ENST00000463486 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 AKR1C3P42330 323 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 UBE2G1P62253 170 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 OR5I1Q13606 314 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 LYPD6BQ8NI32 183 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 VSIG2Q96IQ7 327 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 C9orf85Q96MD7 179 aa12.34□□□□□ -0.43
VPS52-214ENST00000463486 FAT2Q9NYQ8 4349 aa12.33□□□□□ -0.43
VPS52-214ENST00000463486 S100A9P06702 114 aaKnown RBP12.33□□□□□ -0.44
VPS52-214ENST00000463486 P0DMU3 169 aa12.33□□□□□ -0.44
VPS52-214ENST00000463486 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
VPS52-214ENST00000463486 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
VPS52-214ENST00000463486 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
VPS52-214ENST00000463486 H3BNG1 76 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 TEX46H3BTG2 121 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 M0R2P5 195 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 SH2D1AO60880 128 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 FHL2Q14192 279 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 DERL1Q9BUN8 251 aa12.32□□□□□ -0.44
VPS52-214ENST00000463486 KRBOX1C9JBD0 128 aa12.31□□□□□ -0.44
VPS52-214ENST00000463486 RPL35P42766 123 aaKnown RBP12.31□□□□□ -0.44
VPS52-214ENST00000463486 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
VPS52-214ENST00000463486 NHLRC2Q8NBF2 726 aa12.31□□□□□ -0.44
VPS52-214ENST00000463486 ZNF479Q96JC4 524 aa12.31□□□□□ -0.44
VPS52-214ENST00000463486 A0A0J9YY99 117 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 BCL2P10415 239 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 RNF212Q495C1 297 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 DNLZQ5SXM8 178 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 BAGE2Q86Y30 109 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 PTH2Q96A98 100 aa12.3□□□□□ -0.44
VPS52-214ENST00000463486 NUDT3O95989 172 aa12.29□□□□□ -0.44
VPS52-214ENST00000463486 IGLV2-8P01709 118 aa12.29□□□□□ -0.44
VPS52-214ENST00000463486 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 B4DEV8 164 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 ORM1P02763 201 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 BLOC1S1P78537 153 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 VAX2Q9UIW0 290 aa12.28□□□□□ -0.44
VPS52-214ENST00000463486 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 PDE6DO43924 150 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 IFNA1P01562 189 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 CRYBA4P53673 196 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 ZNF876PQ49A33 203 aa12.27□□□□□ -0.45
VPS52-214ENST00000463486 A0A096LPF7 62 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms