RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
VAPB-203ENST00000463370 TEX29Q8N6K0 151 aa9.6□□□□□ -0.87
VAPB-203ENST00000463370 NCR2O95944 276 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 IGHV1-24A0A0C4DH33 117 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 LINC01619G3V211 115 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 K7EQG2 157 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 LINC00614P0C842 121 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 ID1P41134 155 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 C4orf3Q8WVX3 66 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 U3KQK5 164 aa9.59□□□□□ -0.87
VAPB-203ENST00000463370 H3BVH4 76 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 DLX4Q92988 240 aaPredicted RBP9.58□□□□□ -0.88
VAPB-203ENST00000463370 TIMM8BQ9Y5J9 83 aaPredicted RBP9.58□□□□□ -0.88
VAPB-203ENST00000463370 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 OR1N2Q8NGR9 330 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
VAPB-203ENST00000463370 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 EVI2AP22794 236 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 PKIAP61925 76 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 RAB4AP20338 218 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 SPATA12Q7Z6I5 190 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 CHCHD1Q96BP2 118 aaKnown RBP9.57□□□□□ -0.88
VAPB-203ENST00000463370 PRELID3AQ96N28 172 aa9.57□□□□□ -0.88
VAPB-203ENST00000463370 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 KLLNB2CW77 178 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 GNRH2O43555 120 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 NPYP01303 97 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 CD28P10747 220 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
VAPB-203ENST00000463370 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 A0A0J9YX75 114 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 SNAI2O43623 268 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 OR5AL1P0C617 328 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
VAPB-203ENST00000463370 CKS2P33552 79 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
VAPB-203ENST00000463370 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 DPF1Q92782 380 aa9.56□□□□□ -0.88
VAPB-203ENST00000463370 SAMD13Q5VXD3 122 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 TSTD3H0UI37 97 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 RAX2Q96IS3 184 aa9.55□□□□□ -0.88
VAPB-203ENST00000463370 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
VAPB-203ENST00000463370 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
VAPB-203ENST00000463370 ZNF124Q15973 351 aa9.54□□□□□ -0.88
VAPB-203ENST00000463370 SPANXN1Q5VSR9 72 aa9.54□□□□□ -0.88
VAPB-203ENST00000463370 TMEM61Q8N0U2 210 aa9.54□□□□□ -0.88
VAPB-203ENST00000463370 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
VAPB-203ENST00000463370 TRAV12-3A0A0B4J271 114 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 DDTP30046 118 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 FXYD7P58549 80 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 AP5S1Q9NUS5 200 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 A0A096LNJ9 63 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 M0R381 172 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
VAPB-203ENST00000463370 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
VAPB-203ENST00000463370 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
VAPB-203ENST00000463370 SORL1Q92673 2214 aa9.52□□□□□ -0.88
VAPB-203ENST00000463370 HIVEP2P31629 2446 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 KIR2DL5BA0A0G2JN68 375 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 KIR2DL5BA0A0G2JPC4 375 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 KNCNA6PVL3 124 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 LY6G6DO95868 133 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 S100A4P26447 101 aaKnown RBP9.52□□□□□ -0.89
VAPB-203ENST00000463370 ASIPP42127 132 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 SPINK13Q1W4C9 94 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 MAJINQ3KP22 176 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 FA2HQ7L5A8 372 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 KIR2DL5AQ8N109 375 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 PEMTQ9UBM1 199 aa9.52□□□□□ -0.89
VAPB-203ENST00000463370 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
VAPB-203ENST00000463370 MCRIP2Q9BUT9 160 aaKnown RBP9.51□□□□□ -0.89
VAPB-203ENST00000463370 SCRT2Q9NQ03 307 aa9.51□□□□□ -0.89
VAPB-203ENST00000463370 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
VAPB-203ENST00000463370 DEFB131AP59861 70 aa9.51□□□□□ -0.89
VAPB-203ENST00000463370 HILS1P60008 231 aa9.51□□□□□ -0.89
VAPB-203ENST00000463370 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
VAPB-203ENST00000463370 WNK1Q9H4A3 2382 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 C7orf71A4D174 169 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 TNFRSF6BO95407 300 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 FHL3Q13643 280 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
VAPB-203ENST00000463370 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 AGRNO00468 2067 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms