RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
SEMA3D-203ENST00000463315 SPINK4O60575 86 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 UBE2G1P62253 170 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 SGK494Q96LW2 274 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 LINC00479Q96M42 142 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 SPXQ9BT56 116 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 GSN-AS1Q9NRJ2 163 aa9.7□□□□□ -0.86
SEMA3D-203ENST00000463315 GCGP01275 180 aa9.69□□□□□ -0.86
SEMA3D-203ENST00000463315 Q6ZQT7 251 aa9.69□□□□□ -0.86
SEMA3D-203ENST00000463315 Q86TA4 180 aa9.69□□□□□ -0.86
SEMA3D-203ENST00000463315 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
SEMA3D-203ENST00000463315 TRAV34A0A0B4J273 112 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 LTAP01374 205 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 IFNA1P01562 189 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 AKR1C3P42330 323 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 MUC21Q5SSG8 566 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
SEMA3D-203ENST00000463315 A0A1B0GV50 99 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 H3BNG1 76 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 CCL20P78556 96 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 TMEM183AQ8IXX5 376 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 RASL10AQ92737 203 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
SEMA3D-203ENST00000463315 TRGV1A0A0A0MS02 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 PDE6DO43924 150 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 GAGE7O76087 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 Q6ZTI0 123 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 LYPD6BQ8NI32 183 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
SEMA3D-203ENST00000463315 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 F5H768 121 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 P0DMU3 169 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 HTN3P15516 51 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 NKX2-5P52952 324 aaPredicted RBP9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 PTH2Q96A98 100 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 NAGKQ9UJ70 344 aa9.65□□□□□ -0.86
SEMA3D-203ENST00000463315 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 M0R2P5 195 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 GNRH2O43555 120 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 LY6G6CO95867 125 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 GHRHP01286 108 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 TYMSP04818 313 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 BCL2P10415 239 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 SLAQ13239 276 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 FAM162BQ5T6X4 162 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 TMEM88Q6PEY1 159 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
SEMA3D-203ENST00000463315 CIDEAO60543 219 aa9.63□□□□□ -0.87
SEMA3D-203ENST00000463315 NDUFS6O75380 124 aaKnown RBP9.63□□□□□ -0.87
SEMA3D-203ENST00000463315 ZC2HC1AQ96GY0 325 aa9.63□□□□□ -0.87
SEMA3D-203ENST00000463315 RPL35P42766 123 aaKnown RBP9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 CRIP1P50238 77 aa9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 FAM3BP58499 235 aaPredicted RBP9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 RNF212Q495C1 297 aa9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 BAGE2Q86Y30 109 aa9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
SEMA3D-203ENST00000463315 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
SEMA3D-203ENST00000463315 MRPL16Q9NX20 251 aaKnown RBP9.61□□□□□ -0.87
SEMA3D-203ENST00000463315 ALMS1Q8TCU4 4167 aa9.61□□□□□ -0.87
SEMA3D-203ENST00000463315 B4DEV8 164 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 KRBOX1C9JBD0 128 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 SH2D1AO60880 128 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 ORM1P02763 201 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 CXCL1P09341 107 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 HOXA5P20719 270 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 ASIPP42127 132 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 OR5I1Q13606 314 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 IL36BQ9NZH7 164 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 RYR3Q15413 4870 aa9.6□□□□□ -0.87
SEMA3D-203ENST00000463315 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
SEMA3D-203ENST00000463315 TRAV4A0A0B4J268 109 aa9.59□□□□□ -0.87
SEMA3D-203ENST00000463315 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
SEMA3D-203ENST00000463315 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
SEMA3D-203ENST00000463315 XP32Q5T750 250 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms