RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 Q6ZRN7 208 aaPredicted RBP13.59□□□□□ -0.23
VARS-221ENST00000463184 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
VARS-221ENST00000463184 ZNF680Q8NEM1 530 aa13.59□□□□□ -0.23
VARS-221ENST00000463184 NKX6-2Q9C056 277 aaPredicted RBP13.59□□□□□ -0.23
VARS-221ENST00000463184 PGPEP1Q9NXJ5 209 aa13.59□□□□□ -0.23
VARS-221ENST00000463184 EPM2AB3EWF7 344 aa13.58□□□□□ -0.24
VARS-221ENST00000463184 SIVA1O15304 175 aa13.58□□□□□ -0.24
VARS-221ENST00000463184 VGLL1Q99990 258 aa13.58□□□□□ -0.24
VARS-221ENST00000463184 GSN-AS1Q9NRJ2 163 aa13.58□□□□□ -0.24
VARS-221ENST00000463184 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 FAM74A7A6NL05 159 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 GGTLC3B5MD39 225 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 TEX46H3BTG2 121 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 UBE2G2P60604 165 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 ALKAL2Q6UX46 152 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 C11orf72Q8NBR9 251 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 LINC00467Q9BRT7 94 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 ZNF492Q9P255 531 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 RPH3ALQ9UNE2 315 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 ARL2-SNX15V9GYD0 113 aa13.57□□□□□ -0.24
VARS-221ENST00000463184 A0A1B0GV50 99 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 SERTM2A0A1B0GWG4 89 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 C7orf71A4D174 169 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 EREGO14944 169 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 PPT1P50897 306 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 ZNF138P52744 262 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 ANXA2RQ3ZCQ2 193 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 FAM19A4Q96LR4 140 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 EPDR1Q9UM22 224 aa13.56□□□□□ -0.24
VARS-221ENST00000463184 TRGV1A0A0A0MS02 117 aa13.55□□□□□ -0.24
VARS-221ENST00000463184 ZNF324O75467 553 aaPredicted RBP13.55□□□□□ -0.24
VARS-221ENST00000463184 TCRAP04437 139 aa13.55□□□□□ -0.24
VARS-221ENST00000463184 GNG5P63218 68 aa13.55□□□□□ -0.24
VARS-221ENST00000463184 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
VARS-221ENST00000463184 TRBV7-9A0A0J9YWB2 115 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 KLLNB2CW77 178 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 K7EQM0 130 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 NMBP08949 121 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 CRISP2P16562 243 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 CDPF1Q6NVV7 123 aa13.54□□□□□ -0.24
VARS-221ENST00000463184 PAX4O43316 350 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 SPINK4O60575 86 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 PAGE4O60829 102 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 NXPH4O95158 308 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 IFNA7P01567 189 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 TCL1AP56279 114 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 ERVFC1-1P60608 527 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 BLOC1S1P78537 153 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 CST9LP1Q5W188 147 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
VARS-221ENST00000463184 CCL20P78556 96 aa13.52□□□□□ -0.25
VARS-221ENST00000463184 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
VARS-221ENST00000463184 HIST1H2BAQ96A08 127 aa13.52□□□□□ -0.25
VARS-221ENST00000463184 TCEAL7Q9BRU2 100 aa13.52□□□□□ -0.25
VARS-221ENST00000463184 KLF12Q9Y4X4 402 aa13.52□□□□□ -0.25
VARS-221ENST00000463184 FBLL1A6NHQ2 334 aaKnown RBP13.51□□□□□ -0.25
VARS-221ENST00000463184 RNASE4P34096 147 aaKnown RBP13.51□□□□□ -0.25
VARS-221ENST00000463184 SLAQ13239 276 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 IBA57Q5T440 356 aaKnown RBP13.51□□□□□ -0.25
VARS-221ENST00000463184 NFE4Q86UQ8 179 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 Q8TAT8 98 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 MANBALQ9NQG1 85 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 HERC1Q15751 4861 aa13.51□□□□□ -0.25
VARS-221ENST00000463184 TRAV8-1A0A0A6YYK1 113 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 F6UZH7 168 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 GPX1P07203 203 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 TMEM75Q8N9X5 138 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
VARS-221ENST00000463184 PEX7O00628 323 aa13.49□□□□□ -0.25
VARS-221ENST00000463184 XGP55808 180 aa13.49□□□□□ -0.25
VARS-221ENST00000463184 LYPD5Q6UWN5 251 aa13.49□□□□□ -0.25
VARS-221ENST00000463184 GNG13Q9P2W3 67 aa13.49□□□□□ -0.25
VARS-221ENST00000463184 PSG8Q9UQ74 426 aa13.49□□□□□ -0.25
VARS-221ENST00000463184 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 RGS13O14921 159 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 FUSP35637 526 aaKnown RBP eCLIP13.48□□□□□ -0.25
VARS-221ENST00000463184 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
VARS-221ENST00000463184 MRPL23Q16540 153 aaKnown RBP13.48□□□□□ -0.25
VARS-221ENST00000463184 SGK494Q96LW2 274 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 NDFIP1Q9BT67 221 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 HHLA3Q9XRX5 114 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 TNFRSF18Q9Y5U5 241 aa13.48□□□□□ -0.25
VARS-221ENST00000463184 IFNA1P01562 189 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 IGLV2-11P01706 119 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 CRYBA4P53673 196 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 TEX261Q6UWH6 196 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 TXNDC17Q9BRA2 123 aa13.47□□□□□ -0.25
VARS-221ENST00000463184 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 PRR9Q5T870 116 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 LYPD6BQ8NI32 183 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 TVP23CQ96ET8 276 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 TREM1Q9NP99 234 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms