RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
ACTB-207ENST00000462494 LENEPQ9Y5L5 61 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 TRAV8-6A0A0B4J262 113 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 A6NDX4 124 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 OVOL1O14753 267 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 SOCS3O14543 225 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 IGKCP01834 107 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
ACTB-207ENST00000462494 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
ACTB-207ENST00000462494 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
ACTB-207ENST00000462494 SRD5A1P18405 259 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 HSD52Q0P140 79 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 MYOZ3Q8TDC0 251 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 CELSR2Q9HCU4 2923 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 IGKV2D-26A0A0A0MRZ7 120 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 NDUFS8O00217 210 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 MSMBP08118 114 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 TTTY13Q9BZ97 58 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
ACTB-207ENST00000462494 A6NDN8 102 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 TMEM8BA6NDV4 472 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 H3BUA1 57 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 SIVA1O15304 175 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 ATP5LO75964 103 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 ADAMTSL5Q6ZMM2 481 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 CBY1Q9Y3M2 126 aa12.83□□□□□ -0.36
ACTB-207ENST00000462494 ASIPP42127 132 aa12.82□□□□□ -0.36
ACTB-207ENST00000462494 SRSF1Q07955 248 aaKnown RBP eCLIP12.82□□□□□ -0.361e-10■■■□□ 15.6
ACTB-207ENST00000462494 PHLDA3Q9Y5J5 127 aa12.82□□□□□ -0.36
ACTB-207ENST00000462494 K7EP13 123 aa12.82□□□□□ -0.36
ACTB-207ENST00000462494 DPM2O94777 84 aa12.82□□□□□ -0.36
ACTB-207ENST00000462494 PRSS47A8MTI9 375 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
ACTB-207ENST00000462494 MRAP2Q96G30 205 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 GNRH2O43555 120 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 EDN2P20800 178 aa12.81□□□□□ -0.36
ACTB-207ENST00000462494 NAA38Q9BRA0 125 aaKnown RBP12.81□□□□□ -0.36
ACTB-207ENST00000462494 MRPL35Q9NZE8 188 aaKnown RBP12.81□□□□□ -0.36
ACTB-207ENST00000462494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.361e-13■■■□□ 14.7
ACTB-207ENST00000462494 A0A0G2JLM5 398 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 AVPP01185 164 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 MGPP08493 103 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 TMEM95Q3KNT9 176 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 CFAP46Q8IYW2 2715 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 SMIM2Q9BVW6 85 aa12.8□□□□□ -0.36
ACTB-207ENST00000462494 DAZ1Q9NQZ3 744 aaKnown RBP12.8□□□□□ -0.36
ACTB-207ENST00000462494 H3BRM9 83 aa12.79□□□□□ -0.36
ACTB-207ENST00000462494 BRI3O95415 125 aa12.79□□□□□ -0.36
ACTB-207ENST00000462494 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
ACTB-207ENST00000462494 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
ACTB-207ENST00000462494 CSMD2Q7Z408 3487 aa12.79□□□□□ -0.36
ACTB-207ENST00000462494 CRYBG3Q68DQ2 2970 aa12.79□□□□□ -0.36
ACTB-207ENST00000462494 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 NRGNQ92686 78 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 RASL10AQ92737 203 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 H3BUT2 72 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 SPOCK3Q9BQ16 436 aa12.78□□□□□ -0.36
ACTB-207ENST00000462494 FLNCQ14315 2725 aa12.77□□□□□ -0.36
ACTB-207ENST00000462494 GAGE10A6NGK3 116 aa12.77□□□□□ -0.36
ACTB-207ENST00000462494 C9orf118A6NHY6 69 aa12.77□□□□□ -0.36
ACTB-207ENST00000462494 SUMO2P61956 95 aaKnown RBP12.77□□□□□ -0.36
ACTB-207ENST00000462494 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.36
ACTB-207ENST00000462494 B4DSR2 109 aa12.77□□□□□ -0.37
ACTB-207ENST00000462494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.77□□□□□ -0.37
ACTB-207ENST00000462494 GCSHP23434 173 aa12.77□□□□□ -0.37
ACTB-207ENST00000462494 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
ACTB-207ENST00000462494 A0A087WX48 190 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
ACTB-207ENST00000462494 RBX1P62877 108 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 RNF151Q2KHN1 245 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 CSPG4Q6UVK1 2322 aa12.76□□□□□ -0.37
ACTB-207ENST00000462494 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
ACTB-207ENST00000462494 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
ACTB-207ENST00000462494 ORMDL2Q53FV1 153 aa12.75□□□□□ -0.37
ACTB-207ENST00000462494 SCGB3A1Q96QR1 104 aa12.75□□□□□ -0.37
ACTB-207ENST00000462494 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
ACTB-207ENST00000462494 TRBV25-1A0A075B6N4 114 aa12.74□□□□□ -0.37
ACTB-207ENST00000462494 CFHR3Q02985 330 aa12.74□□□□□ -0.37
ACTB-207ENST00000462494 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
ACTB-207ENST00000462494 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
ACTB-207ENST00000462494 ID1P41134 155 aa12.73□□□□□ -0.37
ACTB-207ENST00000462494 APRG1Q8IVJ8 170 aa12.73□□□□□ -0.37
ACTB-207ENST00000462494 C20orf78Q9BR46 151 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms