RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 H1FXQ92522 213 aaKnown RBP2.07□□□□□ -2.08
VPS41-210ENST00000462429 OR8B2Q96RD0 313 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 REG4Q9BYZ8 158 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 COMMD5Q9GZQ3 224 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 TUBA4BQ9H853 241 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 MANBALQ9NQG1 85 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 SMCO4Q9NRQ5 59 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 CBLN4Q9NTU7 201 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 BET1LQ9NYM9 111 aa2.07□□□□□ -2.08
VPS41-210ENST00000462429 RPUSD1Q9UJJ7 312 aaKnown RBP2.07□□□□□ -2.08
VPS41-210ENST00000462429 CARHSP1Q9Y2V2 147 aaKnown RBP2.07□□□□□ -2.08
VPS41-210ENST00000462429 ZGRF1Q86YA3 2104 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 ACACAQ13085 2346 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 A0A087WWC5 75 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 CTXND1A0A1B0GTU2 59 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 DEFB108AA8MXU0 73 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 F6UZH7 168 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 TMEM250H0YL14 139 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 M0R036 132 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 M0R1W7 72 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 PDE6DO43924 150 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 S1PR2O95136 353 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 MT-ND4LP03901 98 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 S100A6P06703 90 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 SFTA3P0C7M3 94 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 METTL15P1P0C7V9 234 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 IAPPP10997 89 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 FGF7P21781 194 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 S100PP25815 95 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 RAB5BP61020 215 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 RHOBP62745 196 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 SMAGPQ0VAQ4 97 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 LTC4SQ16873 150 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 HLA-DRB5Q30154 266 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 CENPWQ5EE01 88 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 C10orf91Q5T1B1 145 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 AMMECR1LQ6DCA0 310 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 TMEM14EPQ6UXP3 125 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 SLC35E3Q7Z769 313 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 RPRMLQ8N4K4 120 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 DEFB108BQ8NET1 73 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 OR1L8Q8NGR8 309 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 MUC7Q8TAX7 377 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 MBD3L1Q8WWY6 194 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 TVP23CQ96ET8 276 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 LINC00052Q96N35 136 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 GAFA1Q96PS6 74 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 PFDN5Q99471 154 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 CCL13Q99616 98 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 TMEM208Q9BTX3 173 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 WDR61Q9GZS3 305 aaKnown RBP2.06□□□□□ -2.08
VPS41-210ENST00000462429 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 TMEM242Q9NWH2 141 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 WASHC3Q9Y3C0 194 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 PHLDA3Q9Y5J5 127 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 USP34Q70CQ2 3546 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
VPS41-210ENST00000462429 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 IGHV3OR15-7A0A075B7D8 119 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 UBE2L5PA0A1B0GUS4 154 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 IGSF23A1L1A6 192 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 TMEM213A2RRL7 107 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 MAP1LC3B2A6NCE7 125 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 OOSP1A8MZH6 123 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 C1orf196B1AJZ1 125 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 E7EQL1 145 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 IGKV1-5P01602 117 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 ORM1P02763 201 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 FBP1P09467 338 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 SAA2P0DJI9 122 aaPredicted RBP2.05□□□□□ -2.08
VPS41-210ENST00000462429 ORM2P19652 201 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 BRS3P32247 399 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 CDC34P49427 236 aaPredicted RBP2.05□□□□□ -2.08
VPS41-210ENST00000462429 GNG10P50151 68 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 ZNF137PP52743 207 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 PRCDQ00LT1 54 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 AKR1C1Q04828 323 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 TMEM267Q0VDI3 215 aaPredicted RBP2.05□□□□□ -2.08
VPS41-210ENST00000462429 COTL1Q14019 142 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 PLGLAQ15195 96 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 C4orf26Q17RF5 130 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 EBLN2Q6P2I7 272 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 ZNF833PQ6ZTB9 187 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 FAM216BQ8N7L0 139 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.05□□□□□ -2.08
VPS41-210ENST00000462429 OR4C12Q96R67 309 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 B9D2Q9BPU9 175 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 TCEAL7Q9BRU2 100 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 NPCDR1Q9BY65 106 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 MAP1LC3BQ9GZQ8 125 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 TMEM133Q9H2Q1 129 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 C11orf1Q9H5F2 150 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 TMEM167BQ9NRX6 74 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 RPRMQ9NS64 109 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 NAT8Q9UHE5 227 aa2.05□□□□□ -2.08
VPS41-210ENST00000462429 PUS1Q9Y606 427 aaKnown RBP eCLIP2.05□□□□□ -2.08
VPS41-210ENST00000462429 ARL2-SNX15V9GYD0 113 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms