RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 LYRM7Q5U5X0 104 aa4.57□□□□□ -1.68
CLK1-207ENST00000461981 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
CLK1-207ENST00000461981 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
CLK1-207ENST00000461981 NBASA2RRP1 2371 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 TRAV40A0A0B4J280 105 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 C17orf98A8MV24 154 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 OVOL1O14753 267 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 TIMM8AO60220 97 aaPredicted RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 PYYP10082 97 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 PAX8Q06710 450 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 FAM53AQ6NSI3 398 aaPredicted RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 MDP1Q86V88 176 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 IFI27L2Q9H2X8 130 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 ZNF256Q9Y2P7 627 aaPredicted RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 NBPF19A0A087WUL8 3843 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 NSD1Q96L73 2696 aaPredicted RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 PRB4P10163 310 aaPredicted RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 DLX6P56179 175 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 KRTAP27-1Q3LI81 207 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 PDPNQ86YL7 162 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 SBSPONQ8IVN8 264 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 SIRPDQ9H106 197 aa4.56□□□□□ -1.68
CLK1-207ENST00000461981 RPUSD1Q9UJJ7 312 aaKnown RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
CLK1-207ENST00000461981 SMG1Q96Q15 3661 aaKnown RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 A0A1W2PNR3 127 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 NCBP2LA6PVI3 153 aaKnown RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 H7C2G1 150 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 CRYGBP07316 175 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 HERVK_113P61574 105 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 EDDM3AQ14507 147 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 MORN5Q5VZ52 161 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 Q6P435 159 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 AMN1Q8IY45 258 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 RTL8AQ9BWD3 113 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 C7orf69Q9H7B7 122 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 UTP20O75691 2785 aaKnown RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 C19orf71A6NCJ1 209 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 SMKR1H3BMG3 65 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 CNTFRP26992 372 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 COQ2Q96H96 371 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 FAM19A4Q96LR4 140 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 SLC25A10Q9UBX3 287 aaPredicted RBP4.55□□□□□ -1.68
CLK1-207ENST00000461981 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 SRRM5B3KS81 715 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 DPM2O94777 84 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 NDUFA3O95167 84 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 CRYGDP07320 174 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 VKORC1L1Q8N0U8 176 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 NF1P21359 2839 aa4.55□□□□□ -1.68
CLK1-207ENST00000461981 IGHV3OR15-7A0A075B7D8 119 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 INS-IGF2F8WCM5 200 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 TRACP01848 142 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 NSUN5P1Q3KNT7 163 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 TEX36Q5VZQ5 186 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 A0A1B0GUT8 65 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 NGFP01138 241 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 PFN2P35080 140 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 TWIST1Q15672 202 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 SCGB1D4Q6XE38 83 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 POM121L12Q8N7R1 296 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 SPTSSAQ969W0 71 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 C2orf48Q96LS8 159 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 TPSG1Q9NRR2 321 aa4.54□□□□□ -1.68
CLK1-207ENST00000461981 MRPL35Q9NZE8 188 aaKnown RBP4.54□□□□□ -1.68
CLK1-207ENST00000461981 PLCE1Q9P212 2302 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 H3BMM0 161 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 P0C879 139 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PATE4P0C8F1 98 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 ZNF22P17026 224 aaPredicted RBP4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRR20EP86478 221 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRR20CP86479 221 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRR20DP86480 221 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRR20BP86481 221 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRR20AP86496 221 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PIFOQ8TCI5 191 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 ITLN1Q8WWA0 313 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 UBE2WQ96B02 151 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FOXB1Q99853 325 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 TET2Q6N021 2002 aaPredicted RBP4.53□□□□□ -1.68
CLK1-207ENST00000461981 CELSR2Q9HCU4 2923 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 LRBAP50851 2863 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A23PA8MXZ1 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 PRSS46E5RG02 174 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 H3BTX0 84 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A15PP0C7V4 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A14PP0C7W9 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 C8orf88P0DMB2 117 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 LEPP41159 167 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 BRWD1-AS2P59051 145 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 C1orf195Q5TG92 126 aa4.53□□□□□ -1.68
CLK1-207ENST00000461981 ANK3Q12955 4377 aaKnown RBP4.53□□□□□ -1.68
CLK1-207ENST00000461981 NOTCH2Q04721 2471 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms