RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 SCGB1C1Q8TD33 95 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 PPP1R1CQ8WVI7 109 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 PCNPQ8WW12 178 aaKnown RBP5.95□□□□□ -1.46
HDAC9-220ENST00000461409 TMED6Q8WW62 240 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 SPXQ9BT56 116 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 INMT-MINDY4F8WBC2 141 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 H0YIZ8 118 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 ORM1P02763 201 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 SRIP30626 198 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 H2BFSP57053 126 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 ERVFC1-1P60608 527 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 FHL2Q14192 279 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 TMEM183BQ1AE95 376 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 FAM74A1Q5RGS3 127 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 MUC21Q5SSG8 566 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 Q6AWC8 147 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 FAM159AQ6UWV7 190 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 Q6ZQT7 251 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-220ENST00000461409 Q6ZSN1 163 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 IQCF2Q8IXL9 164 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 TMEM183AQ8IXX5 376 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 OR10G4Q8NGN3 311 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 RASL10AQ92737 203 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 SCRT2Q9NQ03 307 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 OTORQ9NRC9 128 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 HSPB11Q9Y547 144 aa5.94□□□□□ -1.46
HDAC9-220ENST00000461409 C9JCJ5 164 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 SSNA1O43805 119 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 TDRG1Q3Y452 100 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 LYPD5Q6UWN5 251 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 SH2D6Q7Z4S9 175 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 ARL6IP6Q8N6S5 226 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 HYLS1Q96M11 299 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 TXNDC17Q9BRA2 123 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 MARVELD1Q9BSK0 173 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 MDFICQ9P1T7 246 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 LY96Q9Y6Y9 160 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 DNAH5Q8TE73 4624 aa5.93□□□□□ -1.46
HDAC9-220ENST00000461409 TRAV4A0A0B4J268 109 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 A0A1W2PPV4 95 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 K7EQD1 137 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 MPC2O95563 127 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 GYPEP15421 78 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 EVI2AP22794 236 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 RPL12P30050 165 aaKnown RBP5.92□□□□□ -1.46
HDAC9-220ENST00000461409 DEFA1P59665 94 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 DEFA3P59666 94 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 ACOT6Q3I5F7 207 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-220ENST00000461409 PQLC2Q6ZP29 291 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 C10orf126Q8N4M7 172 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 MBD2Q9UBB5 411 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 NAGKQ9UJ70 344 aa5.92□□□□□ -1.46
HDAC9-220ENST00000461409 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 PGPA6NDG6 321 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 M0R2P5 195 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 SFTA3P0C7M3 94 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 GOLT1AQ6ZVE7 132 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 OR4C5Q8NGB2 326 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 ZNF479Q96JC4 524 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 SMIM3Q9BZL3 60 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 SDF2L1Q9HCN8 221 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 RPH3ALQ9UNE2 315 aa5.91□□□□□ -1.46
HDAC9-220ENST00000461409 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.46
HDAC9-220ENST00000461409 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 SERTM2A0A1B0GWG4 89 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 DNAH10OSP0CZ25 163 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 TIRAPP58753 221 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 IFITM3Q01628 133 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 KCNS1Q96KK3 526 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 NDFIP1Q9BT67 221 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 TREM1Q9NP99 234 aa5.9□□□□□ -1.46
HDAC9-220ENST00000461409 A0A087WTM6 91 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 EPM2AB3EWF7 344 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 K7EQM0 130 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 CRYGDP07320 174 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 PPT1P50897 306 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 NHLRC2Q8NBF2 726 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 ASB13Q8WXK3 278 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 TNFRSF18Q9Y5U5 241 aa5.89□□□□□ -1.47
HDAC9-220ENST00000461409 TRAV8-1A0A0A6YYK1 113 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 F6UZH7 168 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 GNRH2O43555 120 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 CIDEAO60543 219 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 TYMSP04818 313 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 PFN1P07737 140 aaKnown RBP5.88□□□□□ -1.47
HDAC9-220ENST00000461409 ARL14EPLP0DKL9 152 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 RAB2AP61019 212 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 C5orf17Q8NAS9 161 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 OR10G9Q8NGN4 311 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 OR10G7Q8NGN6 311 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 WFDC1Q9HC57 220 aa5.88□□□□□ -1.47
HDAC9-220ENST00000461409 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 IGHV3-38A0A0C4DH36 116 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 FBLL1A6NHQ2 334 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms