RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 A6NIN4 97 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 A6NN06 94 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 JMJD7-PLA2G4BH0Y9G9 81 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 CCDC179H3BU77 68 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 SNAPC5O75971 98 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 SNCGO76070 127 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 OCIAD2Q56VL3 154 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 PP6455Q8WZ26 134 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 SPTSSAQ969W0 71 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 MRPL57Q9BQC6 102 aaKnown RBP1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 CYSTM1Q9H1C7 97 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 MYH1P12882 1939 aa1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 ZFHX2Q9C0A1 2572 aaPredicted RBP1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 EIF4G3O43432 1585 aaKnown RBP1.63□□□□□ -2.15
SPTLC1-203ENST00000461132 BAZ2BQ9UIF8 2168 aaKnown RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 KIAA1549Q9HCM3 1950 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 IGKV2-40A0A087WW87 121 aaPredicted RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 TRAV17A0A0B4J275 112 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 IGKV3D-7A0A0C4DH55 119 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 C20orf202A1L168 122 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 M0R2N4 97 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 CORTO00230 105 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 INE1O15225 51 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 CCL25O15444 150 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 PPYP01298 95 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 IGKV2D-40P01614 121 aaPredicted RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 IL5P05113 134 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 GYPBP06028 91 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 BTG2P78543 158 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 SPANXN1Q5VSR9 72 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 MIC13Q5XKP0 118 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 RPL7L1Q6DKI1 246 aaKnown RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 LINC00322Q6ZN03 302 aaPredicted RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 ZNF625Q96I27 306 aaPredicted RBP1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 SCN3BQ9NY72 215 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 COL24A1Q17RW2 1714 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 DOCK10Q96BY6 2186 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 LAMB2P55268 1798 aa1.62□□□□□ -2.15
SPTLC1-203ENST00000461132 FAM135AQ9P2D6 1515 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 MYOM3Q5VTT5 1437 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 TRBV6-7A0A0A0MS04 114 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 A0A0J9YY99 117 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 GNG4P50150 75 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 GDF5OSQ5U4N7 250 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 ZNF563Q8TA94 476 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 C12orf57Q99622 126 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 SEC11CQ9BY50 192 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 TMEM242Q9NWH2 141 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 STRCP1A6NGW2 1772 aa1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 HEATR1Q9H583 2144 aaKnown RBP1.61□□□□□ -2.15
SPTLC1-203ENST00000461132 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 TRAV23DV6A0A075B6W5 121 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 APOC4-APOC2K7ER74 178 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 NDUFB6O95139 128 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 APOC2P02655 101 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 IL7P13232 177 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 HIST1H1DP16402 221 aaKnown RBP1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 TPPP2P59282 170 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 SPATA45Q537H7 98 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 Q56UQ5 140 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 AGPAT4-IT1Q9H0P7 198 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 WFDC10AQ9H1F0 79 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 ATG5Q9H1Y0 275 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 ZFP30Q9Y2G7 519 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 CECR2Q9BXF3 1484 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 MYH13Q9UKX3 1938 aa1.6□□□□□ -2.15
SPTLC1-203ENST00000461132 SPEF2Q9C093 1822 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 USP54Q70EL1 1684 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 RIMS1Q86UR5 1692 aaKnown RBP1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 ATP6V1G2-DDX39BF2Z307 99 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 PIRTP0C851 137 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 LYPD5Q6UWN5 251 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 C15orf53Q8NAA6 179 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 ZCCHC13Q8WW36 166 aaKnown RBP1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 LINC00526Q96FQ7 95 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 MRPL36Q9P0J6 103 aaKnown RBP1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 SERP1Q9Y6X1 66 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 HELZP42694 1942 aaKnown RBP1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 CEP192Q8TEP8 1941 aa1.59□□□□□ -2.15
SPTLC1-203ENST00000461132 MUC4Q99102 2169 aa1.59□□□□□ -2.16
SPTLC1-203ENST00000461132 GBF1Q92538 1859 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 COL4A5P29400 1685 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 MYH6P13533 1939 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 NALCNQ8IZF0 1738 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 HCRTO43612 131 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 IGHV3-30P01768 117 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 IGHV3-30-5P0DP03 117 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 PPP3R1P63098 170 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 IQCJQ1A5X6 159 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 C12orf73Q69YU5 71 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 GTF2H5Q6ZYL4 71 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 NDUFA11Q86Y39 141 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms