RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, human

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQA1-205	ENST00000460633	SMIM27	A0A1W2PRY6	76 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		K7EN84	100 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ATXN8	Q156A1	80 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZNF876P	Q49A33	203 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LAMTOR3	Q9UHA4	124 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ICE1	Q9Y2F5	2266 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SMKR1	H3BMG3	65 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		M0R2P5	195 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ANXA2R	Q3ZCQ2	193 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZNF747	Q9BV97	191 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	HEATR5B	Q9P2D3	2071 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PRB3	Q04118	309 aa	Predicted RBP	4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	C10orf55	Q5SWW7	151 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TMEM141	Q96I45	108 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PI4KA	P42356	2102 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	COX8A	P10176	69 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	AJUBA	Q96IF1	538 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	UBE2D4	Q9Y2X8	147 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGKV3D-20	A0A0C4DH25	116 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SHISA9	B4DS77	424 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	C17orf77	Q96MU5	243 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGLV3-9	A0A075B6K5	115 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TRAV2	A0A0B4J234	112 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		K7EMT4	169 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGLV1-44	P01699	117 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	AMN1	Q8IY45	258 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CD177	Q8N6Q3	437 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	FAM215A	Q9Y5M1	114 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		A0A1W2PPM0	123 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		G3V4G9	280 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SSBP2	P81877	361 aa	Predicted RBP	4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		Q9HAA7	133 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PMS2P5	A8MQ11	134 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	FAM229A	H3BQW9	127 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGKV2D-40	P01614	121 aa	Predicted RBP	4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZC2HC1B	Q5TFG8	222 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZFP2	Q6ZN57	461 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZNRD1	Q9P1U0	126 aa		4.93	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		A0A1W2PPI3	338 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ARMS2	P0C7Q2	107 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RPL18A	Q02543	176 aa	Known RBP	4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ETDB	Q3ZM63	59 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	OR11H6	Q8NGC7	330 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		Q6YL49	198 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LENEP	Q9Y5L5	61 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GFRA4	Q9GZZ7	299 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PRSS29P	A6NIE9	313 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LOX	P28300	417 aa	Predicted RBP	4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	C1orf159	Q96HA4	380 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CAMK2N2	Q96S95	79 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RETN	Q9HD89	108 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SPANXA1	Q9NS26	97 aa		4.92	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		I3L3M4	83 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	NDUFA1	O15239	70 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SH2D1A	O60880	128 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	FSTL3	O95633	263 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	DEFB125	Q8N687	156 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SPATA3	Q8NHX4	192 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CACNA1E	Q15878	2313 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	DEFB131B	A0A096LNP1	70 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		F8W1H4	67 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		K7ERJ3	54 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	NXPH4	O95158	308 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	HERVK_113	P63121	156 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		Q8N976	141 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PTH2	Q96A98	100 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ERG28	Q9UKR5	140 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV3-64	A0A075B6Q5	118 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CEP290	O15078	2479 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CACNA1D	Q01668	2161 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	DEFB104A	Q8WTQ1	72 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		J3QL48	77 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RNASE2	P10153	161 aa	Known RBP	4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RBM3	P98179	157 aa	Known RBP	4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		Q86TA4	180 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	APC2	O95996	2303 aa		4.91	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TMEM213	A2RRL7	107 aa		4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	BUB3	O43684	328 aa		4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	MDC1	Q14676	2089 aa	Known RBP	4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ZNF134	P52741	427 aa		4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RNF185	Q96GF1	192 aa		4.9	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CENPVL3	A0A0U1RRI6	287 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633		H3BMG7	143 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	DAZ2	Q13117	558 aa	Known RBP	4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	DAZ4	Q86SG3	579 aa	Known RBP	4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	DAZ3	Q9NR90	486 aa	Known RBP	4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	DOCK11	Q5JSL3	2073 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633		F8WDY8	70 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	C3orf84	H3BNL1	204 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	LYPD2	Q6UXB3	125 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633		Q8TAT8	98 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	C11orf52	Q96A22	123 aa		4.9	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	ZNF318	Q5VUA4	2279 aa		4.89	□□□□□ -1.63
HLA-DQA1-205	ENST00000460633	IGLV3-1	P01715	115 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms