RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 IGHV3-16A0A0C4DH30 117 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 NBDYA0A0U1RRE5 68 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 MAP1LC3B2A6NCE7 125 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 PRSS29PA6NIE9 313 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 PAX4O43316 350 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 GCGP01275 180 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 FGF8P55075 233 aaPredicted RBP15.95■□□□□ 0.14
PTPN4-208ENST00000460289 UBE2G2P60604 165 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 ESRGQ1W209 222 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 SMUG1Q53HV7 270 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 OR11H4Q8NGC9 324 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 STOML3Q8TAV4 291 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 C8orf49Q96NF6 230 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 MAP1LC3BQ9GZQ8 125 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 HHLA3Q9XRX5 114 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 DNAH2Q9P225 4427 aa15.95■□□□□ 0.14
PTPN4-208ENST00000460289 A0A096LPF7 62 aa15.94■□□□□ 0.14
PTPN4-208ENST00000460289 TYMSP04818 313 aa15.94■□□□□ 0.14
PTPN4-208ENST00000460289 PPT1P50897 306 aa15.94■□□□□ 0.14
PTPN4-208ENST00000460289 Q9H8V8 135 aa15.94■□□□□ 0.14
PTPN4-208ENST00000460289 TRGV4A0A0C4DH28 118 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 KANTRA0A1W2PQU2 76 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 FAM74A7A6NL05 159 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 M0R2P5 195 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 PFN1P07737 140 aaKnown RBP15.93■□□□□ 0.14
PTPN4-208ENST00000460289 SEC11BP0C7V7 166 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 FHL2Q14192 279 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 HIST1H2BAQ96A08 127 aa15.93■□□□□ 0.14
PTPN4-208ENST00000460289 UMAD1C9J7I0 102 aa15.92■□□□□ 0.14
PTPN4-208ENST00000460289 ZNF80P51504 273 aaPredicted RBP15.92■□□□□ 0.14
PTPN4-208ENST00000460289 CRYBA4P53673 196 aa15.92■□□□□ 0.14
PTPN4-208ENST00000460289 UPK3BQ9BT76 320 aa15.92■□□□□ 0.14
PTPN4-208ENST00000460289 ICOSQ9Y6W8 199 aa15.92■□□□□ 0.14
PTPN4-208ENST00000460289 PEX7O00628 323 aa15.91■□□□□ 0.14
PTPN4-208ENST00000460289 BCL2L11O43521 198 aa15.91■□□□□ 0.14
PTPN4-208ENST00000460289 EIF5AP63241 154 aaKnown RBP15.91■□□□□ 0.14
PTPN4-208ENST00000460289 LINC00479Q96M42 142 aa15.91■□□□□ 0.14
PTPN4-208ENST00000460289 ZNF471Q9BX82 626 aaPredicted RBP15.91■□□□□ 0.14
PTPN4-208ENST00000460289 MRPS16Q9Y3D3 137 aaKnown RBP15.91■□□□□ 0.14
PTPN4-208ENST00000460289 ZNF479Q96JC4 524 aa15.9■□□□□ 0.14
PTPN4-208ENST00000460289 DNAH17Q9UFH2 4485 aa15.9■□□□□ 0.14
PTPN4-208ENST00000460289 TRAV4A0A0B4J268 109 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 TRAV34A0A0B4J273 112 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 SFTA3P0C7M3 94 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 FHITP49789 147 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 MRPL23Q16540 153 aaKnown RBP15.89■□□□□ 0.13
PTPN4-208ENST00000460289 OR4C5Q8NGB2 326 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 TCEAL7Q9BRU2 100 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 ARL2-SNX15V9GYD0 113 aa15.89■□□□□ 0.13
PTPN4-208ENST00000460289 PFDN1O60925 122 aa15.88■□□□□ 0.13
PTPN4-208ENST00000460289 C11orf21Q9P2W6 132 aa15.88■□□□□ 0.13
PTPN4-208ENST00000460289 HECTD4Q9Y4D8 3996 aa15.88■□□□□ 0.13
PTPN4-208ENST00000460289 A0A1B0GVY2 172 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 TTC32Q5I0X7 151 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 DPPA3Q6W0C5 159 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 C6orf223Q8N319 242 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 SFT2D1Q8WV19 159 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 MBD3L1Q8WWY6 194 aa15.87■□□□□ 0.13
PTPN4-208ENST00000460289 FAT2Q9NYQ8 4349 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 FABP5P3A8MUU1 101 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 ORM1P02763 201 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 CST9LP1Q5W188 147 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 TMUB2Q71RG4 321 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 FAM213BQ8TBF2 198 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 ZFP30Q9Y2G7 519 aa15.86■□□□□ 0.13
PTPN4-208ENST00000460289 A0A1W2PPQ1 181 aa15.85■□□□□ 0.13
PTPN4-208ENST00000460289 TPT1P13693 172 aaKnown RBP15.85■□□□□ 0.13
PTPN4-208ENST00000460289 ZNF876PQ49A33 203 aa15.85■□□□□ 0.13
PTPN4-208ENST00000460289 NEGR1Q7Z3B1 354 aa15.85■□□□□ 0.13
PTPN4-208ENST00000460289 Q86TA4 180 aa15.85■□□□□ 0.13
PTPN4-208ENST00000460289 PCNPQ8WW12 178 aaKnown RBP15.85■□□□□ 0.13
PTPN4-208ENST00000460289 FMC1Q96HJ9 113 aa15.85■□□□□ 0.13
PTPN4-208ENST00000460289 C9JCJ5 164 aa15.84■□□□□ 0.13
PTPN4-208ENST00000460289 UBE2G1P62253 170 aa15.84■□□□□ 0.13
PTPN4-208ENST00000460289 K7EQD1 137 aa15.83■□□□□ 0.12
PTPN4-208ENST00000460289 CIDEAO60543 219 aa15.83■□□□□ 0.12
PTPN4-208ENST00000460289 SRIP30626 198 aa15.83■□□□□ 0.12
PTPN4-208ENST00000460289 PTH2Q96A98 100 aa15.83■□□□□ 0.12
PTPN4-208ENST00000460289 C9orf85Q96MD7 179 aa15.83■□□□□ 0.12
PTPN4-208ENST00000460289 PAGE4O60829 102 aa15.82■□□□□ 0.12
PTPN4-208ENST00000460289 LGALSLQ3ZCW2 172 aaPredicted RBP15.82■□□□□ 0.12
PTPN4-208ENST00000460289 LYPD5Q6UWN5 251 aa15.82■□□□□ 0.12
PTPN4-208ENST00000460289 COX8CQ7Z4L0 72 aa15.82■□□□□ 0.12
PTPN4-208ENST00000460289 IGKV3D-20A0A0C4DH25 116 aa15.81■□□□□ 0.12
PTPN4-208ENST00000460289 TRBV6-1A0A0K0K1D8 114 aa15.81■□□□□ 0.12
PTPN4-208ENST00000460289 SIVA1O15304 175 aa15.81■□□□□ 0.12
PTPN4-208ENST00000460289 H2AFB1P0C5Y9 115 aa15.81■□□□□ 0.12
PTPN4-208ENST00000460289 GYPEP15421 78 aa15.81■□□□□ 0.12
PTPN4-208ENST00000460289 RNASE3P12724 160 aaKnown RBP15.8■□□□□ 0.12
PTPN4-208ENST00000460289 BTF3P20290 206 aaKnown RBP15.8■□□□□ 0.12
PTPN4-208ENST00000460289 S100A4P26447 101 aaKnown RBP15.8■□□□□ 0.12
PTPN4-208ENST00000460289 EIF5AL1Q6IS14 154 aaKnown RBP15.8■□□□□ 0.12
PTPN4-208ENST00000460289 TCTE3Q8IZS6 198 aa15.8■□□□□ 0.12
PTPN4-208ENST00000460289 TXNDC17Q9BRA2 123 aa15.8■□□□□ 0.12
PTPN4-208ENST00000460289 RS1O15537 224 aa15.79■□□□□ 0.12
PTPN4-208ENST00000460289 ZC2HC1AQ96GY0 325 aa15.79■□□□□ 0.12
PTPN4-208ENST00000460289 A0A1B0GV50 99 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 NXPH4O95158 308 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 LTAP01374 205 aa15.78■□□□□ 0.12
PTPN4-208ENST00000460289 S100A9P06702 114 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms