RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 ASIPP42127 132 aa8.96□□□□□ -0.98
HDAC4-206ENST00000460235 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
HDAC4-206ENST00000460235 SPXQ9BT56 116 aa8.96□□□□□ -0.98
HDAC4-206ENST00000460235 OSTCQ9NRP0 149 aa8.96□□□□□ -0.98
HDAC4-206ENST00000460235 A8MWL6 223 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
HDAC4-206ENST00000460235 IGLV2-8P01709 118 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-206ENST00000460235 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 CT83Q5H943 113 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 MUC21Q5SSG8 566 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 PRR9Q5T870 116 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 OR2D3Q8NGH3 330 aa8.95□□□□□ -0.98
HDAC4-206ENST00000460235 TIMM8BQ9Y5J9 83 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-206ENST00000460235 A0A1W2PPQ1 181 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 ZNF705GA8MUZ8 300 aaPredicted RBP8.94□□□□□ -0.98
HDAC4-206ENST00000460235 M0R036 132 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 RPL23P62829 140 aaKnown RBP8.94□□□□□ -0.98
HDAC4-206ENST00000460235 OR10G8Q8NGN5 311 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 ANAPC16Q96DE5 110 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 SFRP2Q96HF1 295 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
HDAC4-206ENST00000460235 RPP21Q9H633 154 aaKnown RBP8.94□□□□□ -0.98
HDAC4-206ENST00000460235 TP53TG3Q9ULZ0 132 aa8.94□□□□□ -0.98
HDAC4-206ENST00000460235 C19orf71A6NCJ1 209 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 FAM231BA6NCW3 169 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 PGPEP1LA6NFU8 196 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 F2Z2F3 143 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 MED14OSP0DP75 135 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 CRIP1P50238 77 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 RPL19P84098 196 aaKnown RBP8.93□□□□□ -0.98
HDAC4-206ENST00000460235 DNLZQ5SXM8 178 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 SVBPQ8N300 66 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 SYT8Q8NBV8 401 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 NUDT10Q8NFP7 164 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 ISOC2Q96AB3 205 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 CARHSP1Q9Y2V2 147 aaKnown RBP8.93□□□□□ -0.98
HDAC4-206ENST00000460235 U3KQK5 164 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 X6R8D5 127 aa8.93□□□□□ -0.98
HDAC4-206ENST00000460235 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 K7EN84 100 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 SNAPINO95295 136 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 RBMY1A1P0DJD3 496 aaKnown RBP8.92□□□□□ -0.98
HDAC4-206ENST00000460235 RBMY1CP0DJD4 496 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 TCL1AP56279 114 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
HDAC4-206ENST00000460235 RBMY1FQ15415 496 aaKnown RBP8.92□□□□□ -0.98
HDAC4-206ENST00000460235 LGALS9BQ3B8N2 356 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 IL17DQ8TAD2 202 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
HDAC4-206ENST00000460235 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 IL36BQ9NZH7 164 aa8.92□□□□□ -0.98
HDAC4-206ENST00000460235 IGKV3D-20A0A0C4DH25 116 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 TYMSP04818 313 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 RHEBQ15382 184 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 PIK3CD-AS1Q5SR53 167 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 Q8NAQ8 132 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
HDAC4-206ENST00000460235 PHLDA3Q9Y5J5 127 aa8.91□□□□□ -0.98
HDAC4-206ENST00000460235 IGHV3-16A0A0C4DH30 117 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 CXorf65A6NEN9 183 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 M0R2P5 195 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 GNRH2O43555 120 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 CIDEAO60543 219 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 EMP1P54849 157 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 CACNG7P62955 275 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 PTH2Q96A98 100 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 GSN-AS1Q9NRJ2 163 aa8.9□□□□□ -0.98
HDAC4-206ENST00000460235 TMSB15BA0A087X1C1 80 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 APOC3P02656 99 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 OR5AL1P0C617 328 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 WDR73Q6P4I2 378 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 ZFP82Q8N141 532 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 RETNQ9HD89 108 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
HDAC4-206ENST00000460235 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 AZU1P20160 251 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 S100PP25815 95 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 SPANXN1Q5VSR9 72 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 KCNIP4Q6PIL6 250 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
HDAC4-206ENST00000460235 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 DNHD1Q96M86 4753 aa8.88□□□□□ -0.99
HDAC4-206ENST00000460235 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 A0A087WWC5 75 aa8.87□□□□□ -0.99
HDAC4-206ENST00000460235 TRGV1A0A0A0MS02 117 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms