RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SOCS3O14543 225 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 SMIM17P0DL12 118 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 GNLYP22749 145 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 FAM106AQ4KMX7 169 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 NRACQ8N912 160 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 OR5A1Q8NGJ0 315 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 TMEM158Q8WZ71 300 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 FAM19A4Q96LR4 140 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 SPTAN1Q13813 2472 aaKnown RBP6.75□□□□□ -1.33
HDAC3-202ENST00000459727 PLXNB1O43157 2135 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 A0A087WX48 190 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV4-61A0A0C4DH41 118 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV3-66A0A0C4DH42 116 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 LINC01619G3V211 115 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 NXPH4O95158 308 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 IGLV1-40P01703 118 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 PF4V1P10720 104 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 NMUP48645 174 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 ATP5J2P56134 94 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 SUMO2P61956 95 aaKnown RBP6.74□□□□□ -1.33
HDAC3-202ENST00000459727 LY6DQ14210 128 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 PAPPA-AS1Q5QFB9 102 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 TMEM219Q86XT9 240 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 ZFAND2AQ8N6M9 145 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 FOXC2Q99958 501 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 SPOCK3Q9BQ16 436 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 MSRB1Q9NZV6 116 aa6.74□□□□□ -1.33
HDAC3-202ENST00000459727 PTPRQQ9UMZ3 2332 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 LINC01548A6NM66 108 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 F8VRH5 84 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 H3BUX3 64 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 H3BVH4 76 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 H7C1H1 209 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 K7ERU9 68 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 ZNF207O43670 478 aaKnown RBP6.73□□□□□ -1.33
HDAC3-202ENST00000459727 ADAMTSL5Q6ZMM2 481 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 GPHB5Q86YW7 130 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 POM121L12Q8N7R1 296 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
HDAC3-202ENST00000459727 LRRK2Q5S007 2527 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 COL6A6A6NMZ7 2263 aa6.73□□□□□ -1.33
HDAC3-202ENST00000459727 BOD1L1Q8NFC6 3051 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 CBY3A6NI87 242 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 C19orf84I3L1E1 186 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 CDKN1BP46527 198 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 RPL11P62913 178 aaKnown RBP6.72□□□□□ -1.33
HDAC3-202ENST00000459727 CFHR3Q02985 330 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 TM4SF20Q53R12 229 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 ERASQ7Z444 233 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 TOMM6Q96B49 74 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 RHPN1-AS1Q9BWJ2 59 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
HDAC3-202ENST00000459727 RP1L1Q8IWN7 2480 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-202ENST00000459727 NOTCH2Q04721 2471 aa6.71□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV3OR16-13A0A075B7E8 117 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV3-49A0A0A0MS15 119 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV3-74A0A0B4J1X5 117 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 KLLNB2CW77 178 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
HDAC3-202ENST00000459727 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 FAM159AQ6UWV7 190 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 UNQ9165/PRO28630Q6UXU0 137 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 BRD3OSQ6XYD6 125 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 CHAC1Q9BUX1 264 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 DKK2Q9UBU2 259 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 HHLA3Q9XRX5 114 aa6.71□□□□□ -1.34
HDAC3-202ENST00000459727 SPENQ96T58 3664 aaKnown RBP6.71□□□□□ -1.34
HDAC3-202ENST00000459727 ROS1P08922 2347 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV4OR15-8A0A075B7B6 117 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 A0A087WW49 117 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 K7EP34 96 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 DUSP14O95147 198 aaKnown RBP6.7□□□□□ -1.34
HDAC3-202ENST00000459727 FABP2P12104 132 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 UQCRFS1P47985 274 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 HERVK_113P61574 105 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 ZC2HC1BQ5TFG8 222 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 LINC01356Q8N9X3 169 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 C20orf173Q96LM9 149 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
HDAC3-202ENST00000459727 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 A6NJY4 79 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 OR11H12B2RN74 326 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 LGALS9O00182 355 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV4-38-2P0DP08 117 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 PLA2G2AP14555 144 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 RNASE4P34096 147 aaKnown RBP6.69□□□□□ -1.34
HDAC3-202ENST00000459727 LY6EQ16553 131 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 ANXA2RQ3ZCQ2 193 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 OR11H1Q8NG94 326 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms